| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0992 |
|---|
| Symbol | |
|---|
| ID | 6109910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1092051 |
|---|
| End bp | 1093133 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641620756 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001747866 |
|---|
| Protein GI | 170720178 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0000425136 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAGA CAGGGTTGAT GATCCTGGCG GTGGCCGTCG GTTCGGCCAG GGCTGAGGAT
TGGCCCCTAC CGGATTGGCA GGCCGACATC ACGGCCATCG ACTGGCAGGC TGTCGACAGC
TATGCCTTCC CTGAACGCAA CGCCACCAAG CGCAGCGGCA TTCGCAGCGA CGCCCTGCTG
ATCATTCGCG ACGGCCGTAT CCTGCACGAA CGGTATGCCG CGCCTACCAC CGCGAAAACC
GCCCACCTGA CTTGGTCGGT GAGCAAAAGC GTGCTGGCGA CAGTGCTGGG CGTGGCCCAA
GGTGAGGGCC GTTTTCAGCT GCAGGACCCT GCGGCCCGCT TTTACCCACC CATGCAAGCA
CACCCCGACG TGCGTCTGGC CGATCTGTTG CATTGGGCCA GTGGCCTGGC CTGGCAGGAG
GACTACGAAT ACGCACCGCT GAAATCCTCG GTGGTGGCCA TGCTCTATAC CCGCGGGCGC
CATGACATGG CGGCTTATAC TGCTGCAAGG CCCGTTGCCG AAAAGCCCGG GCAGCGATTC
ATTTATTCGA GTGGCGACAG CAATGTCCTG GCCGCCGCAT TGCGCGGCAT GCTCAAGGGC
AGTTCTTACC CTGACTACCC CTGGCAGGCG CTGTTCACCC CGCTGGGCAT TCACAGCGCC
GTTTGGGAGC GCGATGGCCG TGGCACCTTC GTTGGCTCCT CCTACCTCTA CCTCAGTGCC
CGCGACCTGG CGCGCATCGG CCTGTTGATG CAGCGTGAAG GGCGCTGGGG TGCCCGTCAG
TTGCTGCCGG CAAGCTGGGT TGCCTTCAAT CGTACCCTGT TCAGGCAGGC CACACCGCTG
CCCGGCGAAG CCAACCCGGG TGGCCACTGG TGGCTCAACC AGCCACTGCC GGGCAGTACT
TTGCCTTGGC CTGACGCGCC GGCAGACACC TATGCCGCCC TCGGCCACTG GGGCCAGGCC
CTTTACATAC TGCCGACCCG CAAGCTGGTC ATCGTCCGCT ACGCCGATGA CCGTGATGGC
AGTTACAGCC ATAACGAACT GCTAAAGCGT GTGCTGACAG CGCTGGCCAA GGAGGGTGCA
TGA
|
|---|
| Protein sequence | MLKTGLMILA VAVGSARAED WPLPDWQADI TAIDWQAVDS YAFPERNATK RSGIRSDALL
IIRDGRILHE RYAAPTTAKT AHLTWSVSKS VLATVLGVAQ GEGRFQLQDP AARFYPPMQA
HPDVRLADLL HWASGLAWQE DYEYAPLKSS VVAMLYTRGR HDMAAYTAAR PVAEKPGQRF
IYSSGDSNVL AAALRGMLKG SSYPDYPWQA LFTPLGIHSA VWERDGRGTF VGSSYLYLSA
RDLARIGLLM QREGRWGARQ LLPASWVAFN RTLFRQATPL PGEANPGGHW WLNQPLPGST
LPWPDAPADT YAALGHWGQA LYILPTRKLV IVRYADDRDG SYSHNELLKR VLTALAKEGA
|
|---|
| |