Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0988 |
Symbol | |
ID | 6109906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1088803 |
End bp | 1089384 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620752 |
Product | hypothetical protein |
Protein accession | YP_001747862 |
Protein GI | 170720174 |
COG category | [S] Function unknown |
COG ID | [COG3124] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000194666 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACTACC TCGCACACCT GCACCTGGGC GGCCCGGCGC CGCAACAACT GCTTGGCAGC CTGTATGGCG ATTTTGTCAA AGGCTCGCTG GAGGGGCGCT TTGCGCCGAC GCTGGAGGCC GCCATTCGGC TGCATCGGCA CATCGACAGC TATACCGATC AGCACCCGTT GGTGTTGGCG GCGCTGGCGC GGTTCCCCCG GGAGCGGCGC CGCTATGCCG GGATCATTGT GGATGTGTTC TTCGACCATT GCCTGGCGCA GCACTGGGGC GACTATGCCG AACAGTCGCT GGAGCAGTTT ACCGGTGCGT TCTATCGCGT GTTGCTGGCC GAGCCCGAGT TGCCAGGGCG GCTGGCACGC ATTGCGCCCT TGATGGCCGC AGATGACTGG CTGGGGGCGT ATGGCAATTT TTCCACCCTG GAGCAGGTCT TCAACGGCAT TGGGCGACGC TTGTCCCGAC CTGAGGGCAT GATGGGAGTG ATGGCGGAGC TTGAGCACTT GTACGAGCCG TTGCTGGCTG ATTTCCGTGA GTTCTATCCG CAGTTGCAGA CGTTTGCCGC GGCACAGAGG TCTGGCAGAT AG
|
Protein sequence | MNYLAHLHLG GPAPQQLLGS LYGDFVKGSL EGRFAPTLEA AIRLHRHIDS YTDQHPLVLA ALARFPRERR RYAGIIVDVF FDHCLAQHWG DYAEQSLEQF TGAFYRVLLA EPELPGRLAR IAPLMAADDW LGAYGNFSTL EQVFNGIGRR LSRPEGMMGV MAELEHLYEP LLADFREFYP QLQTFAAAQR SGR
|
| |