| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0975 |
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| Symbol | |
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| ID | 6109893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1073826 |
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| End bp | 1074974 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641620739 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001747849 |
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| Protein GI | 170720161 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0109715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCC GCCGCATGCT CATCATGTTG GCCGTCGTTC TGCTGATCGT GTTGGCCCTG
GGGGGCTACA AGGCCTTCTC GATCTACCAG CAGATCCAGA TGTTCACTGC CCCCAAGCCC
CCCATCACCG TGGCGGCGGC CATGGCCGAG CAACGCCCGT GGCAGCAGCG CCTGCCCGCG
GTCGGCAGCC TCAAGGCCCT GCAGGGTGTC GAGTTGAGCC TCGAGGTGGA AGGCATCGTC
CAATCCCTGC ACTTCGACTC CGGTCAGAAG GTCAAAGCCG GGCAACTGCT GCTCAAGCTC
AATGACGATC AGGAAACAGC CCTGCTGGGG ACCGCCCAAG CCGACCTGGG GTTGGCCAAA
GTGGACTTCG GCCGCGGCAG TCAGCTGGTG GGGGATTCGG CCATTTCTCG TGGTGAATAT
GACCGCCTTA CCGCGCAATA CCGGCGCAAC CAGGCAGTGG TCGACCAGCT CAAGGCCTCG
AAAACCAAGA AGAGCATCAG TGCCCCGTTC AGCGGCACGA TCGGCATCCG CCAGGTGGAT
GTGGGTGATT ACCTGGCGGC CGGCTCGGTG ATCGCTACCC TGCAGGACCT TTCCAGCCTT
TACGTCGATT TCAACGTACC GGAGCAGGCA CTGCCCCAGC TGAGCCTCGG CCAGCAGGTA
CAGGTGCAGG TGGCGGCCTA CCCTGGCCAG ACCTTCCCTG CCAGCCTCAG CGCCATCAAC
CCCAAGGTTG AAGAGAGCAC GCGCAACCTG CTGGTGCGCG CGACCATGGC CAATCCCGAT
GGCAAGCTGT TGCCGGGCAT GTTCGCCAAC CTGCTGGTCC TCCTGCCTGA CCCGCGCCCA
CAGGTGGTGG TCCCCGAAAG CGCCATCACC TACACGCTGT ATGGCAATTC CGTGTATGTC
GCCACGCCGA AGAAAGACAA GGACGGTAAC CCCGAGCGGG ACGACAGTGG CCAGCCGCAG
CTCAGCGCCG AACAGCGCAG CGTGCAGACT GGCGAGCGAC GCGATGGTGT GGTGGTAATC
AGCAAAGGGC TCGCAGCGGG CGAACAGGTG GTCACCGCCG GCCAACTAAA GCTGAGCCCT
GGCGCGGTTA TCCGCATCGG CCAGGACGCA GCGCTCGAGC CCGAACAAGG CGCCCCGCGC
GCGGACTGA
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| Protein sequence | MLRRRMLIML AVVLLIVLAL GGYKAFSIYQ QIQMFTAPKP PITVAAAMAE QRPWQQRLPA
VGSLKALQGV ELSLEVEGIV QSLHFDSGQK VKAGQLLLKL NDDQETALLG TAQADLGLAK
VDFGRGSQLV GDSAISRGEY DRLTAQYRRN QAVVDQLKAS KTKKSISAPF SGTIGIRQVD
VGDYLAAGSV IATLQDLSSL YVDFNVPEQA LPQLSLGQQV QVQVAAYPGQ TFPASLSAIN
PKVEESTRNL LVRATMANPD GKLLPGMFAN LLVLLPDPRP QVVVPESAIT YTLYGNSVYV
ATPKKDKDGN PERDDSGQPQ LSAEQRSVQT GERRDGVVVI SKGLAAGEQV VTAGQLKLSP
GAVIRIGQDA ALEPEQGAPR AD
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