Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0957 |
Symbol | |
ID | 6109875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1054089 |
End bp | 1056119 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620721 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001747831 |
Protein GI | 170720143 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTGC GCCAACGCCT GGAAAACCTC CCGGTCGGGC AGAAGCTGCT GGCCGCCCTG ATGGTGCTGC TGGTGACCAT CCTGCTGGTG GCCAACCTGA CGTTCATCAG TGCCGCCTAC TGGATCACCC AGGAGAGCAT GGCGCCGCAA GCGTTGCAGA CCATCGGCCG CCTGGTCGCC AACCCTCAGC TGGCAGCACG CGCCGGCGAA TCCCAGGACA CTGCCACGGC GCTACTCAAA GAGCTGGACA GCTATACGCC ACTGCGCGCT GCGGCGGTCT ATGGTGGCGA TGGTCGCATG CTGGCCCAGT TGCAACATGG CGACCCGCTG GCCCTGCCCA AGCGCTATCG AAACATCGAC GGCTGGCGCT TGATGGAATT TCGCAGCACC CTACTGATCC GCATCCCCCG TGATGCCCGC CCGCCTGCAC ACCTGCTGCT GGTGGCCAGC AGCGAGCTGC CAACCGCGTT CTATACCGGG ACCCTGAGCG CCAGCCTGGC GATTCTGGTG TTCAGCATCC TGCTATGGCT GGTCATCGCC CGGCAGATCA AGCGTCTGAT CACGCAGCCG ATCAATCAGC TCGAAGAGCT CAGCCGCCAG GTCACCCGCG AAGAAAGCTA CGCGCTGCGA GCCAAAAAGG GCAACGACGA TGAGATCGGC AGCCTCGCCG ACGCCTTCAA CACCATGCTT TCGCGCATCG AGGCGCGCGA GCAGCAACTC AAGCGCACCC GCGACGAATT CCAGGACGCT TACGATCAGG CCCAGGGCCT GGCAGAGGAA ACTCGCCATA CCAACCGCAA GCTGGAACTG GAAGTCCAGG TGCGCAGCAA GATCGAAAAA AAGCTCACGG GCTTTCAGAA TTACCTCAAC AGCATCATCG ACTCCATGCC CTCGGCTCTG ATTGCCCTCG ACGAGCAGCT CTATGTCACA CAGTGGAATC ACGAAGCCAC GGTGCTCTCC GGCACGCCGC TGGACGAAGC GCTGAACCAG CCGATCTTCA TCGCTTTCGA ACCGCTCAAG CCGTTTCTGC CGCAGCTAAA GGAAACCGTG GAGAAACACC GCGTCGCCAA GATCGAGCGG GTGACCTGGG CCAAAGGCGA GGACCTGCGC CATTACGCCC TGACGTTCTA TCCACTGATG GGTGGCGGTG GCCGCGGCGT GGTCATCCGC ATCGACGACA TCACCCAGCG CCTGTCGCTG GAGGAGATGA TGGTGCAATC TGAGAAGATG CTCTCGGTAG GAGGCTTGGC GGCCGGCATG GCGCACGAAA TCAACAACCC GCTGGGCGCG ATCCTGCACA ACGTGCAGAA CATCCGCAGG CGACTGTCGC CGGAGCTGCC ACGCAATCAG GAGCAAGCCG ACGAGCTAGG CATCGACCTG CCCAGCGTCA ATCGCTACCT GGAAAGCCGT GAAGTACCGC AACTGCTCGA CGGCATTCAG CAGGCCGGCG CCCGGGCGGC CAAGATCGTC ACCCATATGC TCAGTTTCAG CCGCCGCAGC AACCGCCAAC TGGCGCCATG CGACCTGCCG GCATTGATCG ACCAGGCCGT GGAAATCGCC GGTAACGACT TTGACCTGAC CATCGGTTTC GATTTCAAGG GCCAAGCCAT TGTCCGCCAG TTCGATCCCA ACCTGGGGCC GGTGCCGTGC ACCGCCAACG AGCTGGAGCA AGTGCTGCTG AACCTGCTGA AAAATGCCGC CCAGGCCATT CACCAACGGC CGCAGCCCAG CGAGCCAGGG CGGATCACCC TGCGTACCCG GCTCAGCCCG CCATGGGCCG AAATCCAGGT GGAGGACAAC GGCGTCGGGA TGCCCGAAGC GGTCCGCAAG CGCACCTTCG AGCCCTTCTT CACCACCAAG GAAATCGGCC AGGGCACCGG GCTCGGGTTG TCGGTTTCAT ACTTCATCAT CACCAATAAC CACAAGGGGC AGATGGAAGT GCAGTCCACG CCCGGCCAGG GCACCTGCTT CACCCTGCGC CTGCCCCTCG GCCAGCCGTC GGCAACGGCC GTGAACCAGA CGGAGACATG A
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Protein sequence | MTLRQRLENL PVGQKLLAAL MVLLVTILLV ANLTFISAAY WITQESMAPQ ALQTIGRLVA NPQLAARAGE SQDTATALLK ELDSYTPLRA AAVYGGDGRM LAQLQHGDPL ALPKRYRNID GWRLMEFRST LLIRIPRDAR PPAHLLLVAS SELPTAFYTG TLSASLAILV FSILLWLVIA RQIKRLITQP INQLEELSRQ VTREESYALR AKKGNDDEIG SLADAFNTML SRIEAREQQL KRTRDEFQDA YDQAQGLAEE TRHTNRKLEL EVQVRSKIEK KLTGFQNYLN SIIDSMPSAL IALDEQLYVT QWNHEATVLS GTPLDEALNQ PIFIAFEPLK PFLPQLKETV EKHRVAKIER VTWAKGEDLR HYALTFYPLM GGGGRGVVIR IDDITQRLSL EEMMVQSEKM LSVGGLAAGM AHEINNPLGA ILHNVQNIRR RLSPELPRNQ EQADELGIDL PSVNRYLESR EVPQLLDGIQ QAGARAAKIV THMLSFSRRS NRQLAPCDLP ALIDQAVEIA GNDFDLTIGF DFKGQAIVRQ FDPNLGPVPC TANELEQVLL NLLKNAAQAI HQRPQPSEPG RITLRTRLSP PWAEIQVEDN GVGMPEAVRK RTFEPFFTTK EIGQGTGLGL SVSYFIITNN HKGQMEVQST PGQGTCFTLR LPLGQPSATA VNQTET
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