| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0950 |
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| Symbol | lpxC |
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| ID | 6109868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1045892 |
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| End bp | 1046803 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641620714 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001747824 |
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| Protein GI | 170720136 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.110652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAGAC AACGCACCCT GAAGAATACC ATCCGTGCCA CAGGCGTCGG CCTGCACTCC
GGGGAGAAGG TCTATCTGAC CCTCAAGCCT GCGCCTGTCG ATACCGGCAT CGTCTTCCGT
CGCGCCGACC TCGACCCTGT GGTCGAGATC CCGGCACGTG CGGCCAACGT CGGTGAGACC
ACCATGTCCA CCACGCTGGT CAACGGTGAC GTCAAGGTCG ATACCGTCGA GCACCTGCTT
TCCGCCATGG CGGGGTTGGG CATCGATAAC GCCTACGTCG AGCTCTCCGC CTCGGAAGTT
CCGATCATGG ATGGCAGCGC CGGTCCCTTC GTATTCCTGA TTCAGTCTGC CGGCCTGGAA
GAGCAGGACG CAGCCAAGAA GTTCATCCGC ATCCTGCGTG AAGTAACAGT GGAAGAGGGC
GACAAGCGCG CCACTTTCCT GCCTTTCGAA GGCTTCAAGG TGAGCTTCGA GATCGACTTC
GATCACCCGG TCCTCAAGGG CCAGACCCAG AGCGCAGTCG TCGACTTCTC CAGCACCTCG
TTCGTGAAGG AAGTCAGCCG CGCCCGCACC TTCGGTTTCA TGCGTGACAT CGAGTACCTG
CGCAAGCACA ACCTTGCGTT GGGCGGCAGT GTCGAGAACG CCATTGTTGT CGATGAGACC
GGCGTGCTTA ACGAAGACGG CCTTCGTTCC GAAGACGAAT TCGTCAAGCA CAAGATCCTC
GACGCCATCG GCGACCTGTA TCTGCTGGGC AACAGCCTGA TTGGCGAGTT CAAGGGCTAC
AAGTCCGGGC ACGCGCTGAA CAACCAGCTG CTGCGCAAGC TCATTGCCGA AACCGATGCC
TGGGAAGTGG TCACCTTCGA AGATGCCAGT ACGGCACCGA TCTCTTATAT GCGCCCTGTT
GCGGCCGTGT AA
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| Protein sequence | MIRQRTLKNT IRATGVGLHS GEKVYLTLKP APVDTGIVFR RADLDPVVEI PARAANVGET
TMSTTLVNGD VKVDTVEHLL SAMAGLGIDN AYVELSASEV PIMDGSAGPF VFLIQSAGLE
EQDAAKKFIR ILREVTVEEG DKRATFLPFE GFKVSFEIDF DHPVLKGQTQ SAVVDFSSTS
FVKEVSRART FGFMRDIEYL RKHNLALGGS VENAIVVDET GVLNEDGLRS EDEFVKHKIL
DAIGDLYLLG NSLIGEFKGY KSGHALNNQL LRKLIAETDA WEVVTFEDAS TAPISYMRPV
AAV
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