| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0945 |
|---|
| Symbol | murC |
|---|
| ID | 6109863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1039979 |
|---|
| End bp | 1041427 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641620709 |
|---|
| Product | UDP-N-acetylmuramate--L-alanine ligase |
|---|
| Protein accession | YP_001747819 |
|---|
| Protein GI | 170720131 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAAA GCCAGAAAGC CATGCCCCAG CCGAAGATGG GCCGTATTCA TCGCATCCAC
TTCGTCGGTA TCGGCGGCGT TGGCATGTGC GGTATTGCCG AAGTGCTGCT GAACCTGGGC
TATGAAGTGT CCGGCTCCGA CCTCAAGGTG TCGCCGGTTA CCCAGCGCCT GGAGTCGTTC
GGTGCCGAAA TCTTCGTCGG CCACCGTGCC GAAAACGCCG CCCATGCTGA TGTGCTGGTA
GTGTCCAGCG CCATCAACCC GGCCAACCCG GAAGTCGCCA CTGCGCTTGA ACGGCGTATT
CCAGTGGTGC CGCGTGCCGA AATGCTCGCT GAGCTGATGC GCTACCGCCA TGGAGTGGCG
GTTGCCGGTA CCCATGGCAA AACTACCACC ACCAGCCTGT TGGCCTCGGT ATTTGCCGCA
GGTGGCCTGG ACCCGACGTT CGTCATCGGT GGCCGCCTGA CCGCTGCCGG CACCAATGCG
CAGTTGGGTA CCAGCCGCTA CCTGATCGCC GAAGCCGACG AAAGCGACGC CAGCTTCCTG
CACCTGCAGC CGATGGTAGC TGTGGTCACC AATATCGACG CCGACCACAT GGCCACCTAC
GAGGGTGACT TCAATAAACT GAAGAAAACC TTCGTCGAGT TCTTGCACAA CCTGCCGTTC
TACGGCCTGG CCGTGATGTG CCTGGATGAC CCTGTGGTGC GTGAGATCCT GCCCCAGGTC
AAGCGCCCGA CCGTGACCTA CGGTTTCTGC GAAGAGGCCG ACATCCGCGC TATCAACGTC
AGCCAGAAGG GCATGCAGAC CCACTTCACA GTGCTTCGCC GTGATCGTGA GCCGTTGGAA
GTCTCGGTCA ACATGCCGGG CAACCACAAT GTGCTCAATG CCCTGGCCAC CATTGCCATC
GCCACTGACG AAGGTATCAG CGACGAAGCC ATCGTGCAGG GGCTGTCCGG CTTCCAGGGC
GTCGGGCGAC GCTTCCAGGT ATACGGCGAA CTGCCGGTCG AGGGCGGCAG CGTGATGCTG
GTCGATGACT ACGGCCACCA CCCGACCGAA GTGGCGGCGG TGATCAAGGC CGTGCGCGGT
GGCTGGCCAA GCCGTCGCCT GGTCATCGTC TACCAGCCAC ACCGTTACAG TCGCACCCGT
GACCTGTACG ACGACTTCGT GCAGGTGCTG GGCGATGCCA ACGTGCTGCT GCTGATGGAG
GTGTACCCGG CCGGTGAAGA GCCGATACCC GGTGCCGACA GCCGTCAGTT GTGCCACAGC
ATCCGCCAGC GCGGCAAGCT GGACCCGATC TACATCGAAC GCGGCGCTGA GCTGGCGCCG
CTGGTCAAGC CGCTGCTGCG TGCCGGTGAC ATCCTGCTGT GCCAGGGTGC CGGCGATGTC
GGTGGCCTGG CCCCGCAATT GATGAAAAGC CCGCTGTTCG CTGGCGCCAA GCAGGAGAAG
TCGAAATGA
|
|---|
| Protein sequence | MVESQKAMPQ PKMGRIHRIH FVGIGGVGMC GIAEVLLNLG YEVSGSDLKV SPVTQRLESF
GAEIFVGHRA ENAAHADVLV VSSAINPANP EVATALERRI PVVPRAEMLA ELMRYRHGVA
VAGTHGKTTT TSLLASVFAA GGLDPTFVIG GRLTAAGTNA QLGTSRYLIA EADESDASFL
HLQPMVAVVT NIDADHMATY EGDFNKLKKT FVEFLHNLPF YGLAVMCLDD PVVREILPQV
KRPTVTYGFC EEADIRAINV SQKGMQTHFT VLRRDREPLE VSVNMPGNHN VLNALATIAI
ATDEGISDEA IVQGLSGFQG VGRRFQVYGE LPVEGGSVML VDDYGHHPTE VAAVIKAVRG
GWPSRRLVIV YQPHRYSRTR DLYDDFVQVL GDANVLLLME VYPAGEEPIP GADSRQLCHS
IRQRGKLDPI YIERGAELAP LVKPLLRAGD ILLCQGAGDV GGLAPQLMKS PLFAGAKQEK
SK
|
|---|
| |