Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0912 |
Symbol | |
ID | 6109829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1008052 |
End bp | 1008789 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641620676 |
Product | S-type pyocin |
Protein accession | YP_001747786 |
Protein GI | 170720098 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.165217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATGCCG CCAACGGTCT GATTGAGGCC AAAAAGGCGC AAGGACCGGC ATTCAGCGAA TCCAACCCGA ACATCATCGG GCCACTGTCC AAGCCGCAAA CCGAAGCCTT GCAACATTTG GTCGATGAGC AGGCCACACG TCGAGCCGGA CAACTGTGGG CGGACTACCA TCGCGCACTC GCGCTGACAG AATCCATTCG CTACCTGCAA GGGTTCAGCG CTGCGATGGG CAACCTGGCT CAGCGCGCCA TTGAGGCGGA GCAACTTCAA GCCAGGCACG CGGCAGAACA GGCTGCGGCC CAGGAAGCTG CACGACTGAA GGCCGAAACG CAACGTTTGG CTGCCGAAGA GGCTGCACGA AAACAGGCAG AAGCCGAACG ACTGGCAGCA CACGCTGAAC GTCAGCGGCA AGAAGCGGCA CGCCAACGCA TCAGCTACAT CAGCGATGCC CGAACCGCAT CCTCAGTACC CACCATCACT CCGATCGGCG CGGCAACGTT CGCACTAGCG GAAAGTGCGT CCACTGTAAT GCTGGAGGCT ATCAAAGCAG CAGTAGCTGG CATGGGGACG GTGGCCGTTG CGGCTGGTCT TCAGTTCATC GTCACCGCTC TGGCAGCAGC TTGGCCATCA ACACTCGGTA GTGCTGATCG GCGCTACCTT GTCAGCACCC CACTCTCCAG ACCCAAGCCT TCTTGGCACT TTCGGCGCCT TGGCCATCAT CTTTTCCACC GGATGTAG
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Protein sequence | MNAANGLIEA KKAQGPAFSE SNPNIIGPLS KPQTEALQHL VDEQATRRAG QLWADYHRAL ALTESIRYLQ GFSAAMGNLA QRAIEAEQLQ ARHAAEQAAA QEAARLKAET QRLAAEEAAR KQAEAERLAA HAERQRQEAA RQRISYISDA RTASSVPTIT PIGAATFALA ESASTVMLEA IKAAVAGMGT VAVAAGLQFI VTALAAAWPS TLGSADRRYL VSTPLSRPKP SWHFRRLGHH LFHRM
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