Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0907 |
Symbol | |
ID | 6109824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1001978 |
End bp | 1002742 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641620671 |
Product | ABC transporter related |
Protein accession | YP_001747781 |
Protein GI | 170720093 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAAG CGATCAAGCA GCCTGCCGGC CCCGAAGGCA TCATCCAGAT GCAGGGCGTC AACAAGTGGT ACGGCCAGTT CCATGTACTG AAGGACATCA ACCTGAACGT GCGCCAGGGT GAGCGTATCG TGCTGTGCGG GCCGTCCGGT TCGGGCAAGT CCACCACCAT CCGCTGTCTC AACCGTCTGG AAGAACACCA GCAGGGGCGC ATCGTGGTTG ATGGTGTGGA GCTGACCAAC GATCTCAAAC AGATCGAGGC GATTCGCCGT GAGGTGGGCA TGGTATTCCA GCACTTCAAC CTGTTCCCGC ACCTGACCAT CCTTGAAAAC TGCACCCTAG CGCCCATGTG GGTACGCAAG ATGCCGCGGC GCAAGGCCGA GGAAATCGCC ATGCACTATC TGGAGCGGGT ACGCATCCCG GAGCAGGCGC ACAAGTACCC GGGGCAGTTG TCCGGTGGCC AGCAGCAGCG CGTGGCGATT GCCCGGGCGC TGTGCATGAA GCCGAAGATC ATGCTGTTCG ACGAGCCGAC GTCGGCGCTC GACCCGGAAA TGGTCAAGGA AGTGCTCGAT ACCATGGTTG GCCTAGCCGA GGACGGCATG ACCATGCTCT GCGTGACCCA CGAAATGGGC TTTGCCCGAA CCGTGGCGAA CCGGGTGATC TTCATGGATA AGGGGGAGAT CGTGGAGCAG GCTGCGCCGG ATGATTTCTT CGACCGGCCG CGCAGTGACC GGACCAAGTT GTTCCTCAGC CAGATCCTGC ACTGA
|
Protein sequence | MSEAIKQPAG PEGIIQMQGV NKWYGQFHVL KDINLNVRQG ERIVLCGPSG SGKSTTIRCL NRLEEHQQGR IVVDGVELTN DLKQIEAIRR EVGMVFQHFN LFPHLTILEN CTLAPMWVRK MPRRKAEEIA MHYLERVRIP EQAHKYPGQL SGGQQQRVAI ARALCMKPKI MLFDEPTSAL DPEMVKEVLD TMVGLAEDGM TMLCVTHEMG FARTVANRVI FMDKGEIVEQ AAPDDFFDRP RSDRTKLFLS QILH
|
| |