| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0906 |
|---|
| Symbol | |
|---|
| ID | 6109823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1000870 |
|---|
| End bp | 1001967 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641620670 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001747780 |
|---|
| Protein GI | 170720092 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGCTC ATGTTTTCAA ACCTGACATG CCGCCACCGG TCAAGACCGT CGGCGTGCTC
GCATGGATGC GGGTAAACCT GTTCTCCAGC TGGCTCAACA CCCTGTTGAC CCTGTTCGCC
GTGTACCTGG TATGGCTGAT CGTACCGCCG CTGCTGCAGT GGGCGCTGAT CGACGCCAAC
TGGGTTGGCA CCACCCGCGC CGACTGCACC AAGGAAGGTG CCTGCTGGGT GTTCATCCAG
CAGCGCTTTG GCCAGTTCAT GTACGGCTAT TACCCGGCTG AGTTGCGCTG GCGCGTGGAC
CTGACCGTAT GGCTTGCCGT GCTTGGCGCT GCGCCGCTGT TCATCAAGCG TTTCCCGCGC
AAGGCCGTTT ACGGCCTGGG CTTTCTGGTG GTGTACCCGA TCCTGGCCTA CACGCTGCTG
CATGGCGGCT ACCTGGGCCT GGAAAGCGTG CCGACCAGCC AGTGGGGCGG GCTGATGCTG
ACCTTGGTGA TCGCCACGGT GGGTATCGTG GGCGCCTTGC CGCTGGGCAT ATTGCTGGCC
CTGGGGCGGC GTTCAAACAT GCCTGCGGTG AAGGTGGTCT GCGTGACCTT CATCGAGTTC
TGGCGTGGCG TGCCGTTGAT CACCGTGCTG TTCATGTCAT CGGTGATGCT GCCGTTGTTC
CTGCCCGAAG GCATGAGCTT CGACAAGCTG CTGCGGGCAA TGATCGGCGT GATCCTGTTC
CAGTCGGCGT ACATCGCCGA GGTGGTGCGC GGCGGCCTGC AGGCCATCCC CAAGGGGCAA
TATGAAGCCG CTGCCGCGAT GGGCCTGGGC TACTGGCGTT CGATGGGCCT GGTGATTCTG
CCGCAGGCCT TGAAGCTGGT GATCCCCGGC ATCGTCAACA CCTTTATCGC GCTGTTCAAG
GACACCAGTC TGGTGATCAT CATCGGCCTG TTCGACCTGC TCAACAGCGT CAAGCAGGCT
GCCGCCGACC CGGCCTGGCT GGGCATGGCC ACCGAGGGCT ATGTGTTCGC AGCCCTGGTG
TTCTGGATCT TCTGTTTCGG TATGTCCCGC TACTCCATGC ACCTGGAGCG CAAGCTGGAC
ACTGGCCACA AGCGTTAG
|
|---|
| Protein sequence | MNAHVFKPDM PPPVKTVGVL AWMRVNLFSS WLNTLLTLFA VYLVWLIVPP LLQWALIDAN
WVGTTRADCT KEGACWVFIQ QRFGQFMYGY YPAELRWRVD LTVWLAVLGA APLFIKRFPR
KAVYGLGFLV VYPILAYTLL HGGYLGLESV PTSQWGGLML TLVIATVGIV GALPLGILLA
LGRRSNMPAV KVVCVTFIEF WRGVPLITVL FMSSVMLPLF LPEGMSFDKL LRAMIGVILF
QSAYIAEVVR GGLQAIPKGQ YEAAAAMGLG YWRSMGLVIL PQALKLVIPG IVNTFIALFK
DTSLVIIIGL FDLLNSVKQA AADPAWLGMA TEGYVFAALV FWIFCFGMSR YSMHLERKLD
TGHKR
|
|---|
| |