| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0904 |
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| Symbol | |
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| ID | 6109821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 998585 |
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| End bp | 999613 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620668 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001747778 |
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| Protein GI | 170720090 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.700259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGT TGAAAACCAC CCTGGCAGTC CTCACCGCTG CCGCCGCGCT GGGCGCCGTG
AGCACTGCCC AGGCCGGCGC CACCCTCGAT GCGGTCAAGA AGAAGGGCTT CGTCCAGTGT
GGCGTGAGCG ACGGTCTTCC AGGCTTCTCG GTACCTGATG CGCAGGGCAA GATCGTCGGT
ATCGACGCTG ATGTCTGCCG CGCCGTGGCC GCCGCCGTGT TCGGCGATGC CACCAAGGTC
AAGTTCAGCC AGCTCAACGC CAAGGAGCGC TTCACTGCGC TGCAGTCCGG CGAAGTCGAC
GTGCTGTCGC GCAACACCAC CTGGACCAGC TCGCGCGATG CCGGCATGGG CCTGGTGTTC
GCAGGCGTCA CTTACTATGA CGGCGTCGGC TTCCTGGTCA ACAAGAAGCT GGGTGTTTCC
AGTGCCAAGG AGCTCGATGG CGCGACCATC TGCATCCAGG CAGGCACCAC CACCGAGCTG
AACGTGTCCG ACTACTTCCG CGCCAACGGC CTGAAGTACA CCCCGATCAC CTTCGATACC
TCCGACGAGA GCGCCAAATC GCTGGAGTCG GGCCGTTGCG ACGTGCTGAC CTCGGACAAG
TCGCAGTTGT TCGCCCAGCG GTCCAAACTG GCCGGTCCAA CCGACTACGT GGTACTGCCG
GAAACCATCT CCAAGGAGCC GCTGGGCCCG GTGGTACGCA AGGGCGACGA GGAGTGGTTC
AGCATCGTCA AATGGACCCT GTTCGCCATG CTCAATGCCG AAGAGGCTGG CGTCACTTCG
AAGAACGTCG AAGCCGAGGC CAAGTCCACC AAGAACCCGG ACACCGCCCG CCTGCTTGGC
GCTGACGGTG AGTATGGCAA GGACCTGAAG CTGCCCAAGG ACTGGGTAGT GCAGATCGTC
AAGCAAGTGG GTAACTATGG CGAGGTGTTC GAGAAGAACC TGGGCCAGAG CACTGACCTG
AAGATCGACC GTGGCATGAA CGCCCTGTGG AACAACGGCG GCATCCAGTA CGCGCCACCT
GTGCGCTGA
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| Protein sequence | MKMLKTTLAV LTAAAALGAV STAQAGATLD AVKKKGFVQC GVSDGLPGFS VPDAQGKIVG
IDADVCRAVA AAVFGDATKV KFSQLNAKER FTALQSGEVD VLSRNTTWTS SRDAGMGLVF
AGVTYYDGVG FLVNKKLGVS SAKELDGATI CIQAGTTTEL NVSDYFRANG LKYTPITFDT
SDESAKSLES GRCDVLTSDK SQLFAQRSKL AGPTDYVVLP ETISKEPLGP VVRKGDEEWF
SIVKWTLFAM LNAEEAGVTS KNVEAEAKST KNPDTARLLG ADGEYGKDLK LPKDWVVQIV
KQVGNYGEVF EKNLGQSTDL KIDRGMNALW NNGGIQYAPP VR
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