Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0896 |
Symbol | |
ID | 6109813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 990930 |
End bp | 991709 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641620660 |
Product | hypothetical protein |
Protein accession | YP_001747770 |
Protein GI | 170720082 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.453621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGACGG TGATTTCCCC CGCCAAGACC CTCGATTACG ACACCCCACC GGTGACCGAG CGTTTTACAC TGCCCCAGTA CCTGGACGAC TCCCAGGAAC TGATCGTGCA ACTGCGTGAG CTGTCACCGG CGCAGATCAG CGAGCTGATG CACCTGTCGG ACAAACTCGC CGGTCTCAAC GCCGCCCGCT TTGGCAGCTG GACGCCAGAC TTCACGCCGG CAAACGCCAA GCAGGCCCTG CTGGCCTTCA AGGGTGACGT GTATACCGGG CTGGACGCCG AAACCCTGAG CGAAGACGAC TTCACCTACG CCCAGCAGCA CCTGCGCATG CTTTCCGGCC TGTACGGCCT GCTGCGCCCG CTCGACCTGA TGCAGCCTTA CCGCCTGGAA ATGGGTACCA AGCTGGCGAA TGCCCGTGGC AAGGACCTGT ACGCCTTCTG GGGCACGCGT ATCAGCCAAT GGCTGAACCA GGCGCTGACC GAGCAGGGCG ATGACCTGCT GTTGAACCTG GCCAGCAACG AGTATTTCAG CGCGGTGAAA CGCAGCGCCC TGAAAGGCCG GGTAATCAAC GTCGACTTCA AGGACCTGAA GAACGGTCAG TACAAGATCA TCAGTTTCTA CGCCAAGAAA GCCCGCGGCA TGATGAGCCG CTTCGTGATC CAGGAACGGG TCAATGACCC GCAGCAGCTC AAGCAGTTCG ATGTACAGGG CTACTACTAC AGCGCCGAAC AGTCCAAGCC TGATCACCTG GTGTTCTTGC GCGATCATCC GGCCGAGTGA
|
Protein sequence | MLTVISPAKT LDYDTPPVTE RFTLPQYLDD SQELIVQLRE LSPAQISELM HLSDKLAGLN AARFGSWTPD FTPANAKQAL LAFKGDVYTG LDAETLSEDD FTYAQQHLRM LSGLYGLLRP LDLMQPYRLE MGTKLANARG KDLYAFWGTR ISQWLNQALT EQGDDLLLNL ASNEYFSAVK RSALKGRVIN VDFKDLKNGQ YKIISFYAKK ARGMMSRFVI QERVNDPQQL KQFDVQGYYY SAEQSKPDHL VFLRDHPAE
|
| |