| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0895 |
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| Symbol | |
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| ID | 6109812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 989644 |
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| End bp | 990861 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641620659 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001747769 |
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| Protein GI | 170720081 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGGT GGCGGTTGCT GTTGTGGCTG CTGGCGTGGT CGGCAGCGTT GCTCCTGTGG
CAAGCCTGGC CTGCTAGCCA GGGACAGGTT GTAGAGGCGC GCTGGTTGTG GGTTGAGCCG
CAGCGGCTGG AAAGCCGGGT GGGCCTGGTC GGCAGGGTAC AGGCGGTCCG CCAGCAGATC
CAGGCTGCGC CATTCGACGG GGTGGTCGCC GAAGTGGAGG TGGAGCCAGG GCAGCGGGTG
GCTCCAGATC AGCCACTGTT CAGGCTCGAT ACCGCACAAC TGGATGTACA GATACGCCAG
GCTGAGGCCG AATGGCTCAA GGCGCGGGCA AGCTTACGCG TGCTACAGGG TTGGCAAACC
GGGCCACAGG TGGCCCGTGC GCGCCGCGCG ATGCTCGGTG CCCGGGCGGC TTTGGCAACC
AGCCAGGCCG CGCTGGCAGA CACCCGGCGC CTGTTCGAGC GGGGGATCGT CGCCCGCATC
GAGGTCGACG GCCTGGCGCA GCAGGTAGTC GCTCAGCGCG AGGCCCTGCG AGATGCCGAA
CAGGAACTGA ACCTGGTGCG CGAACGCGGG CAAGTCGATG AGCTGCGCAT TGCCCAGATG
GAGCTGGCTA ATACCCACGC CCGCTGGCAG GCCAGGCTGG CGCAGCGTGA ACGCAGGATA
GTCAAGGCGC CTTTTGCGGC CTTGGTGGTG CGTGCCGACA ACGCCGGTGG CGGTGCCTCA
CGGCACCTGC AACCGGGCCA GCAGGTGAGC CAGGGGGCGC CTTTGCTGAC GCTGGTCGAC
CTGAGCCAGC TGCAGGTGCT TGCCGCAGTC CAGGAGCATG ATCTGGACAG GCTGCGCGAA
GGGCTGGAGG TCGAGGTCAT CATCGCCGGT CAGCCACTTG CCGGCCAGGT CCAACGCGTT
GCCCTTCAGG CCAGGAACGA TGAAGGGCAG GGGGCCTGGT ACGACGTGCG GGTGGCCTTG
GAGATGCCGA GGGAGCCGTC GACACCGTTG TTGCGCCTTG GGATGACGGC GCAGTTGACA
GTGATCGCGC ACAGAACGGA ACAGGGCATT GCGGTACCGG CAGAGGCGCT GCAGGTGGGT
GAGGCGGGGC AGGCTTACGT GGTTTACCGG GCTATGGGAG ATCGACAGGG GCGCAAGGTA
CCGGTCACGG CAGGTGTCGC GGTAGCGCAG GGGGTCGAGG TGCTGGGGCT ATCGGCGGGT
TATGTGCAAA TTCCGTAA
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| Protein sequence | MIRWRLLLWL LAWSAALLLW QAWPASQGQV VEARWLWVEP QRLESRVGLV GRVQAVRQQI
QAAPFDGVVA EVEVEPGQRV APDQPLFRLD TAQLDVQIRQ AEAEWLKARA SLRVLQGWQT
GPQVARARRA MLGARAALAT SQAALADTRR LFERGIVARI EVDGLAQQVV AQREALRDAE
QELNLVRERG QVDELRIAQM ELANTHARWQ ARLAQRERRI VKAPFAALVV RADNAGGGAS
RHLQPGQQVS QGAPLLTLVD LSQLQVLAAV QEHDLDRLRE GLEVEVIIAG QPLAGQVQRV
ALQARNDEGQ GAWYDVRVAL EMPREPSTPL LRLGMTAQLT VIAHRTEQGI AVPAEALQVG
EAGQAYVVYR AMGDRQGRKV PVTAGVAVAQ GVEVLGLSAG YVQIP
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