Gene PputW619_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0880 
Symbol 
ID6109797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp970121 
End bp971278 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content63% 
IMG OID641620644 
Productalginate O-acetylation protein AlgJ precursor 
Protein accessionYP_001747754 
Protein GI170720066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.860776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGA CATTACGCAT CACCTATTCC CTGTCGTTCA TCGGCCTGCT GGTAGGCATG 
GGCGCCTGGT CCACCGGTGG CCTGCAAAGC TTCCAGCGCA CCGAACAGAT GACCGTGCTC
AACGGCAAGC TGGCCAAGGC CGCCGAGACG CACTACGACG ACGAGTTCCC GATCAAGCGC
CTGGGCACCA ACCTCTGGGC CGCGCTGGAT TACAAGCTGT TCAACGAAGG CCGCCCGGGC
GTGGTGCTGG GCCGTGACCA GTGGCTGTTC AGCGACGAAG AGTTCAAACC GACTGCCGGT
GCCGACCAGC TCATGCAGGA AAACCTGGCG CTGATCCGCG GTGTGCGCGA CACCCTGCAA
CAGCACGGCA GCCAGCTGGT GCTGGCGATC GTGCCGGCCA AAGCGCGGGT CTACTCGGAG
TATCTGGGCA AGGAGACGCC AGCCAGCCTG CATGACGACC TGTACAACCA GTTCCATGCC
CAGGTCCGTC AGGCCAACGT GTTCGCCCCT GACCTGATGG CCCCGATGGA ACAGGCCAAG
GCCCGCGGCC AAGTATTCCT GCGTACAGAT ACCCACTGGA CACCGATGGG CGCTGAAGTC
GCCGCACAGG CAGTGGCCGA GGCGGTCAAC CGCCAGAGCC TGCTCAATGG CGACCCACAG
ACGTTCATCA CCGAGGCTGG CAGCACTGCC CCGTACAAGG GCGACCTGAC CAACTTCCTG
CCACTGGACC CGCTGTTCAG CAACCTGCTG CCCAACCCGG ACACCCTGCA GCAACGCAGC
ACGCGCCCGG TCGAGGCAGA AGGTGATGCG GGCGATGCCC TGTTCGCCGA CAGCCAGATC
CCAGTCGCCC TGGTCGGCAC CAGCTACAGC GCCAACCCGC ACTGGAACTT CCTCGGCGCG
CTGCAGCAGG CCCTGCACAG CGATGTCGCC AACTATGCCG AAGACGGCCA CGGCCCGCTG
CTGCCAATGC TCAAGTACCT GCAAAGCGAT GCCTTCAAGA ACGCCGCGCC ACAGGTTGTG
GTGTGGGAAT TCCCCGAACG TTATCTGCCA ATGAAAAACG ACCTCAGCAG CTTCGATCCA
CAGTGGATCG CGCAACTGAA GAACACCCGC AAATCCGAAG AAAACCTGGC CCTGTCGTCC
AACCGGACGG ACCACTGA
 
Protein sequence
MTRTLRITYS LSFIGLLVGM GAWSTGGLQS FQRTEQMTVL NGKLAKAAET HYDDEFPIKR 
LGTNLWAALD YKLFNEGRPG VVLGRDQWLF SDEEFKPTAG ADQLMQENLA LIRGVRDTLQ
QHGSQLVLAI VPAKARVYSE YLGKETPASL HDDLYNQFHA QVRQANVFAP DLMAPMEQAK
ARGQVFLRTD THWTPMGAEV AAQAVAEAVN RQSLLNGDPQ TFITEAGSTA PYKGDLTNFL
PLDPLFSNLL PNPDTLQQRS TRPVEAEGDA GDALFADSQI PVALVGTSYS ANPHWNFLGA
LQQALHSDVA NYAEDGHGPL LPMLKYLQSD AFKNAAPQVV VWEFPERYLP MKNDLSSFDP
QWIAQLKNTR KSEENLALSS NRTDH