| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0878 |
|---|
| Symbol | |
|---|
| ID | 6109795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 967960 |
|---|
| End bp | 969414 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641620642 |
|---|
| Product | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| Protein accession | YP_001747752 |
|---|
| Protein GI | 170720064 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGG TAATTCTTTC TGGTGGTAGC GGTTCGCGTC TGTGGCCTTT GTCGCGCAAG
CAGTTCCCCA AGCAGTTCCT CGCCCTGACC GGTGAGCACA CGCTGTTCCA GCAAACCCTC
GAGCGCCTGG TGTTCGAAGG CATGGATGCA CCGATCGTGG TCTGCAACAA GGACCACAAG
TTCATCGTCC AGGAACAGCT CGCAGCGCTG AAACTGCAAA CCCAGGGCAT CCTGATGGAA
CCCTTCGGCC GCAACACGGC CCCTGCGGTA GCGATGGCCG CCATGAAGCT GGCCAACGAG
GGGCGCGATG ACTTGATGCT GGTGCTTCCG GCCGACCACG TGATCGACGA CCAGAAAGCC
CTGCAGCGTG CCCTGGCCCT GGCTACCGTA GCCGCCGAGC GTGGCGAAAT GGTGCTGTTC
GGCGTACCGG CGACCAGGCC CGAGACAGGC TATGGCTACA TCCGCTCCAG CCAGGACGCC
CTGCTGCCCG AAGGCGTGGC CCGGGTGGCG CAGTTCGTCG AAAAACCCGA CGAAAAGCGC
GCCGCCGAAT TCGTCCAGTC CGGAGGCTAC TTCTGGAACA GCGGCATGTT CCTGTTCCGC
GCCAGCCGCT TCCTTGAAGA GCTGAAAAAG CACGACCCTG ACATCTATGA CACCTGCGTG
CTGGCCCTGG AGCGCAGCGA CGAAACAGAT GATGTGCTGA GCATCGACGA AGCGACATTC
GCCTGCTGCC CGGACAACTC CATCGACTAT GCGGTGATGG AAAAGACCCA GCGCGCCTGC
GTGGTACCGA TGTCGGCTGG CTGGAGCGAC GTCGGCTGCT GGTCGTCGCT GTGGGAAGTG
CATGACAAGG ACGCCAATGG CAACGTCACC AAGGGTGATG TGGTGGTGCA GGACAGCCGC
AATTGCATGA TCCATGGCAA TGGCAAGCTG GTGTCGGTGA TCGGCCTGGA AAATATCGTC
GTGGTCGAGA CCAAGGACGC GATGATGATC GCCCACAAGG ACAAGGTCCA GGGCGTCAAG
CAGATGGTCA AGACCCTCGA CGAGCAAGGC CGTAGCGAAA CCCAGAACCA TCTCGAAGTG
TACCGCCCGT GGGGCTCTTA CGATTCGGTG GACATGGGCG GCCGCTTCCA GGTCAAGCAC
ATCACCGTCA AGCCGGGCGC CAGCCTGTCG CTGCAGATGC ACCACCACCG GGCCGAGCAC
TGGATCGTGG TATCGGGCAC CGCCGAAGTG ACGTGCGATG AAAACGTGTT CCTGCTCACC
GAAAACCAGT CGACCTACAT CCCGATCGCT TCGGTCCACC GCCTGCGCAA CCCGGGCAAG
ATCCCGCTGG AGATCATCGA AGTGCAGTCC GGCAGTTACC TGGGCGAGGA TGATATCGAG
CGCTTCGAAG ATGTGTATGG GCGCACGTCC ACTCCCGTCG AACGGGGCGT ATCGGTGAAG
ACCATCGCGC AGTAA
|
|---|
| Protein sequence | MIPVILSGGS GSRLWPLSRK QFPKQFLALT GEHTLFQQTL ERLVFEGMDA PIVVCNKDHK
FIVQEQLAAL KLQTQGILME PFGRNTAPAV AMAAMKLANE GRDDLMLVLP ADHVIDDQKA
LQRALALATV AAERGEMVLF GVPATRPETG YGYIRSSQDA LLPEGVARVA QFVEKPDEKR
AAEFVQSGGY FWNSGMFLFR ASRFLEELKK HDPDIYDTCV LALERSDETD DVLSIDEATF
ACCPDNSIDY AVMEKTQRAC VVPMSAGWSD VGCWSSLWEV HDKDANGNVT KGDVVVQDSR
NCMIHGNGKL VSVIGLENIV VVETKDAMMI AHKDKVQGVK QMVKTLDEQG RSETQNHLEV
YRPWGSYDSV DMGGRFQVKH ITVKPGASLS LQMHHHRAEH WIVVSGTAEV TCDENVFLLT
ENQSTYIPIA SVHRLRNPGK IPLEIIEVQS GSYLGEDDIE RFEDVYGRTS TPVERGVSVK
TIAQ
|
|---|
| |