| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0873 |
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| Symbol | |
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| ID | 6109790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 963496 |
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| End bp | 964557 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641620637 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001747747 |
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| Protein GI | 170720059 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACA AGCGCAAGAC AATCGTGATC GGCTCGGTAC TCGCCGTGGC CGTGCTGGCG
GGTATCGTCG GCCCCTGGCT GCTCGGCAGT GACCACCGGC AAAGCACCAA CGACGCCTAC
GTGATCGCCG ATTACACCGT AGTGGCGCCC AAGGTGGCCG GCTTCGTCAA GCAAGTGCTG
GTCGAAGACA ACCAGCAGGT GCAGGCCGGC CAGTTGCTGG CGACCATCGA TGCGCGGGAC
TACCAGGCCG CCCTGGATGC CGCGCAGGCC CAGTTGCTGG TGGCCCAGGC GCAAAGCGCC
GATGCCCGTG CCACCCTGGA ACGCCAGGCG GCATTGATTG CCCAGGCTGA GGCGGCGGTG
AAGGCGGCGC AGGCCGAAGC ATCGTTCGCC GATCACGAGG TCAACCGCTA CAGCCGTCTC
GCCCAGCAGG GCGCCGGCAC CGTGCAGAAT GCCCAACAGG CGCGTAGCCG GGTTGACCAG
GCCCGTGCAC GGCTGGCCAA TACCCAGGCT GCATTGGTTG CCGCGCGCAA GCAGGTGGAC
ATCCTCAGCG CTCAGGTAGC CAGCGCCGAT GGGCAGTTGA AGCGTGCCGA AGCGGGCCTT
GAGAAAGCTC AGCTGGACCT GTCCTACACG CGCATTACCG CCCCGGTGGA TGGCATGGTC
GGTGAGCGTG CCCTGCGCGT TGGCGCCTTC GTCAACCCGG GCGCGCGGCT GCTGTCGGTG
GTGCCCTTGC AGCATGCCTA TGTGGTCGGC AATTTCCAGG AAACCCAGCT GACCCATGTG
CAGCCGGGGC AGCCTGTCAG TATCAGCGTC GATACCTTTT CCGGTGAAAC CCTCAAGGGC
CATGTCCAAA GCATTGCGCC TGCCACTGGC GTGACCTTCG CCGCAGTAAA GCCCGACAAC
GCCACCGGCA ACTTCACCAA GGTCGTGCAG CGCATCCCGG TGAAAATCGT CTTCGATGAC
GGCCAGCCGT TGCTTGCGCG CCTGCGTGTG GGCATGTCGG TAGAAGCGAC CATCGACACC
CGTGGTGACA CGTTCAGTGG CAAAGAGGTG AGTACACGAT GA
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| Protein sequence | MTNKRKTIVI GSVLAVAVLA GIVGPWLLGS DHRQSTNDAY VIADYTVVAP KVAGFVKQVL
VEDNQQVQAG QLLATIDARD YQAALDAAQA QLLVAQAQSA DARATLERQA ALIAQAEAAV
KAAQAEASFA DHEVNRYSRL AQQGAGTVQN AQQARSRVDQ ARARLANTQA ALVAARKQVD
ILSAQVASAD GQLKRAEAGL EKAQLDLSYT RITAPVDGMV GERALRVGAF VNPGARLLSV
VPLQHAYVVG NFQETQLTHV QPGQPVSISV DTFSGETLKG HVQSIAPATG VTFAAVKPDN
ATGNFTKVVQ RIPVKIVFDD GQPLLARLRV GMSVEATIDT RGDTFSGKEV STR
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