| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0869 |
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| Symbol | |
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| ID | 6109786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 959277 |
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| End bp | 960146 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620633 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001747743 |
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| Protein GI | 170720055 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT TCTTCAGCCT GTTTGCTACC TTGCTGGTGC TGACCATGGC CGTGGTGATC
GGTCGCCAGT TGTGGCTGCA CTACATGACT ACGCCCTGGA CCCGTGACGG GCGCGTGCGG
GCCGACATCA TCAATGTGGC CGCCGACGTG CCCGGTTATG TGGTGGACGT ACCGGTCAAG
GATAACCAGC GGGTGAAGAA GGGCGACCTG CTGATCCGGG TCGACCCCGA GCACTACCAG
CTGGCTGTCG ACCAGGCCAA GGCGTTGGTC GCCTCGCGCA AGGCCACCTG GGAGATGCGC
AAGGTCAACG CCCGCCGCCG TGCCGACATG GACAACCTGG TGATCTCCAA GGAAAACCGC
GACGACGCCA GCAACATCGC CAATGCCGCC CTGGCCGACT ATCAACAGGC CCAGGCAGCA
CTGGCAGCGG CCGAGCTGAA CCTCAAGCGC ACCCGTATCG TTGCCACGGT CGATGGTTAC
GTAACCAACC TGAATATCCA CAAGGGTGAC TATGCGCGTA CCGGTGAGGC GGTGATGGCA
GTGGTCGATG AAAACTCGTT CTGGGTTTAC GGCTTCTTTG AGGAAACCAA GCTGCCGCAC
GTGAAGGTGG GTGACCAGGC TGAGCTGCAG ATGATGAGCG GCGAACGGCT CAAGGGCCAC
GTGCAGAGCA TCGCCCGCGG TATCTACGAC CGCGACAACC CGCAGAGCCG CGAGCTTATT
GCCGACGTGA ACCCGACCTT CAACTGGGTG CGCCTGGCCC AGCGCGTGCC GGTGCGGATT
CACATTGATG AAGTGCCGGA CGGGTTTCTG CTGGCGGCGG GGACGACGTG TACGGTGGTG
GTGAAACCGA GCGAGGGTGG AGCGGGCTAG
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| Protein sequence | MKKFFSLFAT LLVLTMAVVI GRQLWLHYMT TPWTRDGRVR ADIINVAADV PGYVVDVPVK
DNQRVKKGDL LIRVDPEHYQ LAVDQAKALV ASRKATWEMR KVNARRRADM DNLVISKENR
DDASNIANAA LADYQQAQAA LAAAELNLKR TRIVATVDGY VTNLNIHKGD YARTGEAVMA
VVDENSFWVY GFFEETKLPH VKVGDQAELQ MMSGERLKGH VQSIARGIYD RDNPQSRELI
ADVNPTFNWV RLAQRVPVRI HIDEVPDGFL LAAGTTCTVV VKPSEGGAG
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