| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0866 |
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| Symbol | |
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| ID | 6109783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 955358 |
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| End bp | 956887 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641620630 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001747740 |
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| Protein GI | 170720052 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCGTC GCATCATCAG AACGCTTCAG GCGTTCAGTG CCTGTGCCCT TAGCCTCACC
TTGAGCGGCT GTATCGGAAC CTGGGGCATT GCCCCACAGA GCAAGACCCT CCAAGCCAAT
ACCTTGACCA CCGACGCGGC CATCCGTGAA GCCGCCAGCG ATGCCCACTG GCCCGACCAG
CAGTGGTGGC ACGCCTACCG AGATCCGCAG CTCAACCGTT GGCTCGACCT GGCTATGGCC
GGTAGCCCGA CCCTGGCCAT GGCCGCAGCG CGGGTGCGCG CAGCCAAAGC CATGGCCGGT
GTGGTCGAGT CGGCAGAAAA GCTGCAGGCC AACGGCCAGG CGTCGCTCAA ACGCCACAAC
TGGCCTGAAG ACCAGTTCTA TGGCCCGGGC GCCCTGTCGG GTGCCAACAC CTGGGACAAC
AACGCCGCCA TCGGCTTCAG CTATGCCCTG GACCTCTGGG GGCGCGAGCG CAATGCCAGC
GAACAGGCCG TGGACCAGGC CCACATGAGC GTGGCCGAAG CCCGCCAGGC GCAACTGGAA
CTGCAGAACA ATGTGGTGCG TGCCTACATT CAGCTCAGCC TGCACTTCGC CCAGCGCGAC
ATCGTCAAGG CCGAGCTGGA GCAGCAGGAG CAGATCCTGG CTTTGGCCAA GCGCCGCCTG
GACGGCGGTA TCGGTACCCA TTTCGAGGTC AGCCAGGCCG AAGCCCCGCT ACCCGAAACC
CATCGCCAAC TGGACAGCCT CGACGAAGAA ATCGCGCTTA CCCGCAATCA GCTGGCTGCG
CTGGCGGGCA AGGGGCCAGG GGAGGGGGCG CAGATCCAGC GCCCCAGCCT GGCCCTCGCC
GCCCCGCTGC AACTGCCGTC GGCGCTGCCC GCCGAGCTGG TCGGCCAGCG CCCCGACGTG
GTCGCCAGCC GCTGGCAGGT GGCCGCGCAG GCGCGTGGCA TCGACGTCGC CCACGCCGGC
TTCTTCCCCA ACGTCGACCT GGTCGGCAGC CTGGGCTTCA TGGCCACCGG TGGCGGGCCG
CTGGAATTCC TCACCGGGCG CAAGTTCAAC TACAACGTCG GGCCGGCCAT CAGCCTGCCG
ATCTTCGACG GCGGCCGCTT GCGCTCGCAG CTGGGTGTGG CCTCGGCGGG CTATGACGTG
GCCGTGGCGC ACTACAACCA GACGGTCATC GGCGCGCTGA AGAACATTTC CGACCAGTTG
ATCCGCCGTG AGTCGATGAA GGAGCAGGCC CATTTCGCCG CCGAATCCGT GGCCGCTGCA
CAGAAAACCT ACGATATTGC CATGGTCGCC TTCCAGCGCG GGCTGACCGA CTACCTCAAC
GTGCTCAATG CCCAGACTTT GCTGCTGCGT CAGCAGCAGG TGCAACAGCA GGTGCAGGCC
GCGCGCCTGA TCGCCCATGC CGAGCTGGTG ACCGCGTTGG GTGGTGGCCT GCAGGCCGGC
AAGGACGTGC CTGAGCAGGA GCGCCAGACG GCGCCGAAAA CCCCAGCCAC CCTGGCTGTT
TTCGACCGCA AACCGGACCA CGCCGAATGA
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| Protein sequence | MPRRIIRTLQ AFSACALSLT LSGCIGTWGI APQSKTLQAN TLTTDAAIRE AASDAHWPDQ
QWWHAYRDPQ LNRWLDLAMA GSPTLAMAAA RVRAAKAMAG VVESAEKLQA NGQASLKRHN
WPEDQFYGPG ALSGANTWDN NAAIGFSYAL DLWGRERNAS EQAVDQAHMS VAEARQAQLE
LQNNVVRAYI QLSLHFAQRD IVKAELEQQE QILALAKRRL DGGIGTHFEV SQAEAPLPET
HRQLDSLDEE IALTRNQLAA LAGKGPGEGA QIQRPSLALA APLQLPSALP AELVGQRPDV
VASRWQVAAQ ARGIDVAHAG FFPNVDLVGS LGFMATGGGP LEFLTGRKFN YNVGPAISLP
IFDGGRLRSQ LGVASAGYDV AVAHYNQTVI GALKNISDQL IRRESMKEQA HFAAESVAAA
QKTYDIAMVA FQRGLTDYLN VLNAQTLLLR QQQVQQQVQA ARLIAHAELV TALGGGLQAG
KDVPEQERQT APKTPATLAV FDRKPDHAE
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