| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0858 |
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| Symbol | |
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| ID | 6109775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 945805 |
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| End bp | 948195 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620622 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001747732 |
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| Protein GI | 170720044 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA CCCACCGTTG CGTCCCCCTC TGGCTTGGTC TCTCAGCGCT TTCGGCCTTG
GCTGCTGCCC CTTGTGTCCT TGCCGCCGAG CAGCTTGAAC TGCACAGGTT CGCCCAGCCG
AGCAAGCCCT TGCCCCAGGC GCTCAATGCC TTCAGCCGCG CCACCGGCCA GAGCGTGGTC
TACACCTTGG AACTTCCTGC CGTGCAGGCA CCGGCCCTGC AGGGTACGTT CAGTGCCGAA
CAGGCGCTGC AGCAATTGCT GGGCAACGCT GGCCTGACCT GGCGCCGGGT CGATGCCCGC
ACCCTGACGC TTGAACCGGT GGACACCTCC GGTGCGCTCA ACCTGCAGGC CACCACGGTG
ACCTCGCAGA TGGACACCTA CAGCTATCAG CCGCCGGCCA GCGCCTCGAT CATGCGTGGC
CAGGGCCCGT CCCAGAATAT CCCCCAAGCC ATCAACGTGG TCCCGGCCCA GGTCATCCGC
GACCAGGCCC CGCGCAACCT GGATGACGCC CTTGCCAATG TCAGCGGTAT CACCCAGGGC
AACAATTTCG GTGGCACCTC CGACACGGTA ATGAAGCGCG GCTTCGGCGA TAACCGCGAC
GGTTCGATCA TGCGCGATGG TATGCCCGTC GTGCAGGGGC GCAGCCTCAA TGCGAGCACC
GAACGGGTCG AGGTACTCAA GGGCCCGGCT TCGCTGTTGT ATGGCATCCA GGACCCGGGC
GGGGTGATCA ACGTGGTCAG CAAGCGCCCG CAATTGCAGC AGTACAACGC CCTGACCGTG
CGCGGTTCGA CCTACGGCAG CGGCAAGAAC GGCAGCGGCG GCGGGGTCGA CAGCACCGGG
GCACTGGGCG ACAGCAACTT CGCCTACCGT TTGATCGTCG ATCATGAGGA CGAGGATTAC
TGGCGTAACT ATGGCGTGCA CCGCGAATCG CTGGTGGCGC CGTCGCTGGC CTGGCTGGGC
GAGGACACCC AAGTGGTGCT GGCATATGAG CACCGTGAAT TTCTCTACCC GTTCGACCGG
GGCACCGCGT TCGGCAGCAA CGGCCACCCA CTGGACATTC CGGCCACGCG TCGCCTGGAT
GAACCCTTCA ACGACATGGA AGGCCGCTCC GACCTGTATC GCCTGGAGGT CGATCACCAG
CTGGCCAACG ATTGGAAACT GCACTTTGGC TACAGCTTCA ACCGCGAGAC TTACGACGCC
AGCCAGGTGC GCGTGACCGG TGTCAACGAA GCCAAGGGCA CGCTCACGCG CAGCATCGAT
GGCACCCACA ACGCCATGAG TCGCGACCAG TTCGCGACCC TGAGCCTCAA TGGCAACGTC
GAGCTTGCCG GAATGCAGCA TGACCTGCTC ATTGGCATTG ATCACGAAGA CCGCAAGGTC
TTTCGCGGCG ACCTGATTCG CCAGACCGCT CAGTCCACCT TCAGTTATTT GAACCCGGTC
TATGGCCAGG AAGTGGAGGG CAGTACGGTG CGCGCCAGCG ACAGTGACCA GACCGACAAG
CTGCGCACCG ACGCGCTGTT CCTGCAGGAC GCACTGCACC TGGACGAACA CTGGATACTG
GTGGCCGGCG CCCGCTTTCA GCAGTACGAC CAGTACGCCG GCCGCGGCCG GCCGTTCAAG
GCCAATACCG ACACCAGTGG CCAGGCCTGG GTACCGCATG CCGGCATCGT CTACAAGGTC
GATGAGCAGT TGTCGTTCTA TGGTAGTTAC AGCGAGTCGT TCAAACCCAA CTCCAGCATT
GCCCCGCTGA CCGGTGGCGT CGTGCTGGAT TCGTCGATTG CGCCCGAAGA GGGTAAGTCG
TGGGAGCTGG GTGCCAAGCT CGACATGCCT GGCAGCCTGA CCGGCACCTT GGCGCTGTTC
GACATCACCA AGCGCAACGT GCTGGTCTCC AACTTCGACA GCGGTACCGG CGAGACGGTT
TACAGCAATG CGGGCGAGGT CAGTTCAAGG GGGGTGGAGC TTGACCTGAC CGGACAGCTC
AGTGAACGTT GGAGCCTGAT CGGCAGCTAT GCCTTTACCG ACGCCAAGGT GACCAAGGAC
CCGGACCTTG AGGGTAACCG CCTGCAGAAC GTGGCCAGGC ACAGTGGCTC ATTGTCGGCG
GTGTATGACT TCGGCAGCCT GTTCGGCGGC GACAGTTTGC GTTTCGGTGC CGGAGCCCGT
CATGTCGGCG AGCGCCCGGG CAACTCGACC AATACCTTCG ACTTGCCCAG CTACACCGTT
GCCGATGCCT TCGCCACGTA TGAGACCCGG CTCGACGAGC ACAACGTGCG CCTGCAACTG
AACGTGAAGA ACCTGTTCGA CAAGGTCTAC TACAGCTCGG CGGTGAACCA ATACTTCGTT
GCCATAGGTG ATGCACGCCA GGTGAGCCTG TCGAGTACCT TCGAGTTCTA G
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| Protein sequence | MKFTHRCVPL WLGLSALSAL AAAPCVLAAE QLELHRFAQP SKPLPQALNA FSRATGQSVV
YTLELPAVQA PALQGTFSAE QALQQLLGNA GLTWRRVDAR TLTLEPVDTS GALNLQATTV
TSQMDTYSYQ PPASASIMRG QGPSQNIPQA INVVPAQVIR DQAPRNLDDA LANVSGITQG
NNFGGTSDTV MKRGFGDNRD GSIMRDGMPV VQGRSLNAST ERVEVLKGPA SLLYGIQDPG
GVINVVSKRP QLQQYNALTV RGSTYGSGKN GSGGGVDSTG ALGDSNFAYR LIVDHEDEDY
WRNYGVHRES LVAPSLAWLG EDTQVVLAYE HREFLYPFDR GTAFGSNGHP LDIPATRRLD
EPFNDMEGRS DLYRLEVDHQ LANDWKLHFG YSFNRETYDA SQVRVTGVNE AKGTLTRSID
GTHNAMSRDQ FATLSLNGNV ELAGMQHDLL IGIDHEDRKV FRGDLIRQTA QSTFSYLNPV
YGQEVEGSTV RASDSDQTDK LRTDALFLQD ALHLDEHWIL VAGARFQQYD QYAGRGRPFK
ANTDTSGQAW VPHAGIVYKV DEQLSFYGSY SESFKPNSSI APLTGGVVLD SSIAPEEGKS
WELGAKLDMP GSLTGTLALF DITKRNVLVS NFDSGTGETV YSNAGEVSSR GVELDLTGQL
SERWSLIGSY AFTDAKVTKD PDLEGNRLQN VARHSGSLSA VYDFGSLFGG DSLRFGAGAR
HVGERPGNST NTFDLPSYTV ADAFATYETR LDEHNVRLQL NVKNLFDKVY YSSAVNQYFV
AIGDARQVSL SSTFEF
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