| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0848 |
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| Symbol | |
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| ID | 6109765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 938099 |
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| End bp | 939358 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641620612 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001747722 |
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| Protein GI | 170720034 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAGTT CCGAGCGTTG CAGTTCAAAA CGGTTCTTCA GTCTCGCGTG CCTTGCCCTG
CTCACGGTTG CGCTGCTGCC GAACGCCCAT GGTGCCAGCA AAGGCTGCGA AGCATTTGCC
CAGCTACCTT CGGTGATCGA AATCGACCAA GGCCTGCAGC AAGAATTGCG CTTGCCGCTG
GCGATCACCC GGGCCGCCGT CGGCGACCCC AAGGTTGCCG ACGTGCAACC CAGCGGTGAC
CGCGCCGTGC TGGTGACGGC CGTGGGCCAA GGCAATACCA CGCTCATGCT GTGGACAGCC
TGCGCACCGG GGCCACATCG GGCCATGCTG TTCGTCAAAG GCCAAGCCAG CGCCGCCATG
GCCGAAACGG GCCTGCCGCC GTCGCTGGAT CCGGAGTTGC CAAGCCAGGT GCAGGCCGAT
ATCCGCTTCG TCGAGGTGCG CCGCACCAAG TACAAGGAAG CCGGCGCCCG GCTGTTTTTC
AGCGGCTCGA ACAACAGCCT GATCGGGTCG CCGGGCACCG TGCCAGGCAC TTCTGTGACA
CCGGGCGCCG TGCCTGTCAC CTCGCCGCAG ATCCCGCTCA ACAACGGTGT GTTCAACATC
GTCTGGGGCG GCGGCAGCAG CCGTTTCCTG GCGGCCATCA ATGCTCTGGA AAACAGCGGT
TTCGCCTACA CCCTGGCGCG GCCCAGCCTC ACCGTGCTCA GCGGCCTGAC TGCAAGCTTC
CTGGCCGGTG GCGAGATACC GATCCCGGTG CCCAGCGCCG GCAGTGACAA CTTCTCGATC
GAGTACAAGG AGTTCGGCGT GCGTCTGGCA CTGACGCCGA CCGTGATCAG CCGCGACCGC
ATTACCCTGA AGGTAGCGCC TGAAGTCAGC GAGCTGGATT ACACCAATGC GGTGACCATT
GGCGGCACAA GCGTACCGGG GCTGAGCATA CGGCGCACCG ATACCAGCAT TTCCCTGGCC
GATGGCGAGA GTTTCATCAT CAGCGGCCTG GTCGGCAACA ACACCCGCTC CGCCGTGGAC
AAGCTCCCCG GGCTGGGCAA CTTGCCGATC CTTGGCGCGT TCTTCCGGCA ATCGGCCCTG
GTGCGTGAGG AGACCGAGTT GCTGATGATC GTCACCCCGC ACCTGGTTCA ACCGCTGGCG
GCCAATGCCC GCCTGCCGGA ACTGCCAGGC GAGGGGTTGC GTACCTACGA CCCCAGCTGG
GGCCGGCTGT TCTTCATGGA AAACGGCAAC TTCGATGGCC AAAGCGGGTT ATCACGATGA
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| Protein sequence | MRSSERCSSK RFFSLACLAL LTVALLPNAH GASKGCEAFA QLPSVIEIDQ GLQQELRLPL
AITRAAVGDP KVADVQPSGD RAVLVTAVGQ GNTTLMLWTA CAPGPHRAML FVKGQASAAM
AETGLPPSLD PELPSQVQAD IRFVEVRRTK YKEAGARLFF SGSNNSLIGS PGTVPGTSVT
PGAVPVTSPQ IPLNNGVFNI VWGGGSSRFL AAINALENSG FAYTLARPSL TVLSGLTASF
LAGGEIPIPV PSAGSDNFSI EYKEFGVRLA LTPTVISRDR ITLKVAPEVS ELDYTNAVTI
GGTSVPGLSI RRTDTSISLA DGESFIISGL VGNNTRSAVD KLPGLGNLPI LGAFFRQSAL
VREETELLMI VTPHLVQPLA ANARLPELPG EGLRTYDPSW GRLFFMENGN FDGQSGLSR
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