Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0846 |
Symbol | |
ID | 6109763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 935659 |
End bp | 936915 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641620610 |
Product | type II secretion system protein E |
Protein accession | YP_001747720 |
Protein GI | 170720032 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCG ACCAACCCTT CGGCGGCCCC CACCATGCCT CGGGCGACCC TTATGCGCTC AAGCGTGCGC TGCACCGCTT TGCCATCGAT GCCATCGAAG ACAGCGGCCG CAACCTGCTC GAAGGCGCAC GCCCGGCACT GACGCAGTTT GTGCTGGAGC AGGTGGGCGA TTACGTGGCA CGCCTGCGCC TGGCAATGTC ACGCTACGAA ATGGAGCGCC TGGCCGAAGA ACTGGTCGAC GAGCTGACCG GGTTCGGGCC GCTGGAGGTG CTGCTGCGGG ACGCCAGTGT CACCGAGATT CTGGTCAACG GGCCGCACAG GGTGTTCGTC GAGCGGGCCG GGCAGTTGCA ACAGACCGAC CTGCGTTTCA TCGATGCCCA ACACGTCGAG CGCGTCATGC AGCGCATCCT CGCACCGCTC GGGCGGCGCC TGGACGAATC GTCGCCGATG GTCGACGCGC GCCTGCCGGA CGGCAGCCGG GTCAACGCGA TCATTCCACC CGTGGCCCTG GACGGGCCAT GCCTGTCGAT CCGCAAATTC CGCCAGGACA TGCTCAAAAG CGCCGACCTG CTCGCCACCC GCGCCATCGA CCAGCACATT TTCGACTTCC TCGAGCGCGC CGTGGGTCGG CGCTGCAACA TCCTGGTCAG TGGCGGCACC GGCACCGGCA AGACCACCCT GCTGAACATC CTCAGCCAGA TGATCGCCCC GCGCGAGCGC CTGGTGACCA TCGAAGACGT CGCCGAATTG CAACTGCACC ATCCCCACGT GGTACGCCTT GAGACCCGCC CGCCAAATGC CGAGGGGCAC GGCGAGATCA AGGCCAGCGA GCTGATCCGC AATGCCCTGC GCATGCGCCC GGACCGTATC ATCCTCGGCG AGATCCGCGG CACCGAGGTG CTGGACGTGC TCACCGCGAT GAACACCGGC CACGACGGCT CGATGAGTAC GGTGCACGCC AACACCGCGC AGGACGCCTT GCTACGCCTG GAAACCCTGG TTGGCCTGAG CGGGCGGCAG ATCGCCGAGA AGACCTTGCG GCAGATGATC TGCGCGGCAC TGGACGTGGT GATCCAGCTG GCCCGCCTGC CCGACGGGCG CCGCTGCGTC AGTGAAATCC TGGAAGTGGT CGGCGTGCGT GACGACGTGT ACGTGACCAG CACGCTGTTC CGGCTCGACC GCCGCGGCGG CGACGTGTTT CTGCGGGAGG CGCCGAACCC CGCAGGCAGC AAACTGCGCC ATGAAGGTGT GCAATGA
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Protein sequence | MNGDQPFGGP HHASGDPYAL KRALHRFAID AIEDSGRNLL EGARPALTQF VLEQVGDYVA RLRLAMSRYE MERLAEELVD ELTGFGPLEV LLRDASVTEI LVNGPHRVFV ERAGQLQQTD LRFIDAQHVE RVMQRILAPL GRRLDESSPM VDARLPDGSR VNAIIPPVAL DGPCLSIRKF RQDMLKSADL LATRAIDQHI FDFLERAVGR RCNILVSGGT GTGKTTLLNI LSQMIAPRER LVTIEDVAEL QLHHPHVVRL ETRPPNAEGH GEIKASELIR NALRMRPDRI ILGEIRGTEV LDVLTAMNTG HDGSMSTVHA NTAQDALLRL ETLVGLSGRQ IAEKTLRQMI CAALDVVIQL ARLPDGRRCV SEILEVVGVR DDVYVTSTLF RLDRRGGDVF LREAPNPAGS KLRHEGVQ
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