Gene PputW619_0844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0844 
Symbol 
ID6109761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp933891 
End bp934778 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content66% 
IMG OID641620608 
Producttype II secretion system protein 
Protein accessionYP_001747718 
Protein GI170720030 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2064] Flp pilus assembly protein TadC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTGT TGCTATGTGC CGTGTGCCTG TTCATCGCCG CCGGCCTGCT TGGCTTGCAG 
GCCGCCCGCC AGCTGCGTGC CCGCTACCTG GTCGCTCGCA GGCTGCAGGG GCGGCTGGCG
CGCGAGGAGC GCCTGGGGGA CTGGCTGCAC TGGCTGGGCA ATAGCCCCCT GGGGCAACGC
CTGCAGAAAC TCGACGGGGA AACCCAGGCC TTGCTTGACC GTGTCGGCTG GCGCCGCAGC
CGCCAGCGGG CGCTGTTTGC TGCCATGCAA CTGGGGCTGC CGCTGGTGGC GGTCATACTG
ACCCTGATCC TCCAACAAGC CGCACTGGGC AGTGACGGCA CGCACTGGCT GGTCTGGCCG
TTGTTTGCCT TGGGTGCCAG CTACCTGTTG CCCAAGCGCT TGCTGGCGGT TGCCGCCAGG
CGGCGCCAGC AGCGCATCGC CCTGGAAGTC AGCCTGATGA TTCCGCTGCT ACGCATTCTC
TTCGAGACCG GCCTGGCCGT AGAGCAGGCG TTGCGCGTGC TGAGCCAGGA AGGCCAGGCG
CTGCTACCCG AAATCAGCGA AGAGTTGCGC CAGGTGCTGC AACGCGTTGA CTCAGGCCTG
GCGCTCGGCC CGGAGCTGGA AAAGAGCGCG CGGGTACTGG CCGTGGATGA GTTCATCGAC
ACCTGTGTGA TCCTTCAACA GTTGCTGGTA CAGGGCAGCG GTGCGATGAA ATCGCTGCTC
GCGCTCAAGG ACCTGCTCGA TGACCGGCGC CTGACACGCA TGCAGGAACG GGTATCGAAG
ATGTCGGCAA AGATGTCGGC TGTGATGATG GTATTCCTGT TCCCGGCACT GCTCATCGTC
CTGGCCGGGC CGGGATTTTC CGCCTTGACG CGGGCCTTGG GCCCCTAG
 
Protein sequence
MALLLCAVCL FIAAGLLGLQ AARQLRARYL VARRLQGRLA REERLGDWLH WLGNSPLGQR 
LQKLDGETQA LLDRVGWRRS RQRALFAAMQ LGLPLVAVIL TLILQQAALG SDGTHWLVWP
LFALGASYLL PKRLLAVAAR RRQQRIALEV SLMIPLLRIL FETGLAVEQA LRVLSQEGQA
LLPEISEELR QVLQRVDSGL ALGPELEKSA RVLAVDEFID TCVILQQLLV QGSGAMKSLL
ALKDLLDDRR LTRMQERVSK MSAKMSAVMM VFLFPALLIV LAGPGFSALT RALGP