Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0844 |
Symbol | |
ID | 6109761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 933891 |
End bp | 934778 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641620608 |
Product | type II secretion system protein |
Protein accession | YP_001747718 |
Protein GI | 170720030 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTGT TGCTATGTGC CGTGTGCCTG TTCATCGCCG CCGGCCTGCT TGGCTTGCAG GCCGCCCGCC AGCTGCGTGC CCGCTACCTG GTCGCTCGCA GGCTGCAGGG GCGGCTGGCG CGCGAGGAGC GCCTGGGGGA CTGGCTGCAC TGGCTGGGCA ATAGCCCCCT GGGGCAACGC CTGCAGAAAC TCGACGGGGA AACCCAGGCC TTGCTTGACC GTGTCGGCTG GCGCCGCAGC CGCCAGCGGG CGCTGTTTGC TGCCATGCAA CTGGGGCTGC CGCTGGTGGC GGTCATACTG ACCCTGATCC TCCAACAAGC CGCACTGGGC AGTGACGGCA CGCACTGGCT GGTCTGGCCG TTGTTTGCCT TGGGTGCCAG CTACCTGTTG CCCAAGCGCT TGCTGGCGGT TGCCGCCAGG CGGCGCCAGC AGCGCATCGC CCTGGAAGTC AGCCTGATGA TTCCGCTGCT ACGCATTCTC TTCGAGACCG GCCTGGCCGT AGAGCAGGCG TTGCGCGTGC TGAGCCAGGA AGGCCAGGCG CTGCTACCCG AAATCAGCGA AGAGTTGCGC CAGGTGCTGC AACGCGTTGA CTCAGGCCTG GCGCTCGGCC CGGAGCTGGA AAAGAGCGCG CGGGTACTGG CCGTGGATGA GTTCATCGAC ACCTGTGTGA TCCTTCAACA GTTGCTGGTA CAGGGCAGCG GTGCGATGAA ATCGCTGCTC GCGCTCAAGG ACCTGCTCGA TGACCGGCGC CTGACACGCA TGCAGGAACG GGTATCGAAG ATGTCGGCAA AGATGTCGGC TGTGATGATG GTATTCCTGT TCCCGGCACT GCTCATCGTC CTGGCCGGGC CGGGATTTTC CGCCTTGACG CGGGCCTTGG GCCCCTAG
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Protein sequence | MALLLCAVCL FIAAGLLGLQ AARQLRARYL VARRLQGRLA REERLGDWLH WLGNSPLGQR LQKLDGETQA LLDRVGWRRS RQRALFAAMQ LGLPLVAVIL TLILQQAALG SDGTHWLVWP LFALGASYLL PKRLLAVAAR RRQQRIALEV SLMIPLLRIL FETGLAVEQA LRVLSQEGQA LLPEISEELR QVLQRVDSGL ALGPELEKSA RVLAVDEFID TCVILQQLLV QGSGAMKSLL ALKDLLDDRR LTRMQERVSK MSAKMSAVMM VFLFPALLIV LAGPGFSALT RALGP
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