Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0818 |
Symbol | |
ID | 6109735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 910205 |
End bp | 911497 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641620582 |
Product | fumarylacetoacetase |
Protein accession | YP_001747692 |
Protein GI | 170720004 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCAGT CCGCCATTGC CCGTAGCTGG GTCGAGCACG CCAACGGGCA CAGCGACTTC CCGCTGCAGA ACCTGCCGTT GGGCATCTTC AGCCGCCCAG GTGAAACGCT GCGCTGCGGC GTTGCCATCG GTGATGCGAT TCTCGACCTG GAGGCCGTGC TGGCTGCCGG GCTGTTCGAA GGCCAGGCCA AGGCCGCCGT GGAGGCTACC CGTGGTGGCG CGCTGAACGC CTTTTTCGCC CTCGGCCGAG AGGCCCGCGT GGCGTTGCGC GAGCGGTTGT TGGCGCTGTT GGGCGAACAC AGCGAGCATC AGGCTGTGCT CAAGGGCGCG CTGCATCCTG CCAGTGATTG CCAGTTGCAT TTGCCAGCCA AGGTCGGCGA CTACACCGAT TTCTACGTAG GCATCCAGCA CGCTACCAAC GTCGGCAAGC TGTTCCGCCC CGATAACCCA CTGCTGCCCA ACTACAAGTA CGTTCCGATC GGCTACCACG GCCGCGCCTC GACGCTGCGC CCGTCAGGCA CCGATGTACG CCGCCCCAAG GGCCAGACGC TACCCGCCGG GCACACCGAA CCGAGCTTCG GCCCGTGCGC GCGCCTGGAT TACGAACTTG AGCTGGGTAT CTGGATTGCC CGGGGTAACG AGATGGGACA GGCGATTCCG ATCGCTGAAG CCGATCAGCA CCTGGCTGGC CTGTGCCTGC TCAACGATTG GTCGGCGCGT GATATCCAGG CCTGGGAATA CCAGCCGCTG GGGCCGTTCC TGTCCAAGAG CTTCATCACC ACGCTGTCGC CCTGGGTGGT CACCGCCGAG GCCCTGGAGC CTTTCCGCTG CGCCCAGCCG GCGCGCCCGC AAGGTGATCC ACAACCGTTG CCCTACCTGC TTGACCCGCG TGACCAGGCC AGTGGCGCCT TCGACATCGA GCTGGAAGTG CTGCTGATCA CCGAGCGCAT GCGTGAGCAG GGCTTGCCGG CCCACCGCCT GGCGCTGAGC AACACCCTGA ACATGTACTG GACAGTGGCG CAGCTGATTG CCCATCACAG TGTCAACGGC TGCCAGTTGC AGCCAGGCGA CCTGTTCGGC TCGGGCACGC TGTCCGGCGC TTCGCCCGAT GCCTACGGCA GCCTGCTGGA GACCACCTTG GGTGGCAAGC AGCCGGTGGA GCTGGCCAGT GGCGAGCAGC GCAAGTTCCT CGAGGACGGC GATGAGATCA TCCTGCGTGC CCGTTGCAAG CGTGACGGTG TGGCCAGCAT CGGCTTTGGT GAGTGCCGCG GCAAGATCAT CGCCGCTAAC TGA
|
Protein sequence | MNQSAIARSW VEHANGHSDF PLQNLPLGIF SRPGETLRCG VAIGDAILDL EAVLAAGLFE GQAKAAVEAT RGGALNAFFA LGREARVALR ERLLALLGEH SEHQAVLKGA LHPASDCQLH LPAKVGDYTD FYVGIQHATN VGKLFRPDNP LLPNYKYVPI GYHGRASTLR PSGTDVRRPK GQTLPAGHTE PSFGPCARLD YELELGIWIA RGNEMGQAIP IAEADQHLAG LCLLNDWSAR DIQAWEYQPL GPFLSKSFIT TLSPWVVTAE ALEPFRCAQP ARPQGDPQPL PYLLDPRDQA SGAFDIELEV LLITERMREQ GLPAHRLALS NTLNMYWTVA QLIAHHSVNG CQLQPGDLFG SGTLSGASPD AYGSLLETTL GGKQPVELAS GEQRKFLEDG DEIILRARCK RDGVASIGFG ECRGKIIAAN
|
| |