| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0817 |
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| Symbol | |
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| ID | 6109734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 908900 |
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| End bp | 910201 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641620581 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_001747691 |
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| Protein GI | 170720003 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.633132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCG ACACGTCGCC CGACCTTCAG TACCTGAGCG GCTTCGGCAA TGAGTTCGCC
AGTGAAGCCC TGCCCGGGGC CCTGCCCGTC GGGCAAAATT CTCCGCAGAA GGCCCCCTAC
GGCCTGTATG CCGAGCTACT GTCGGGTACG GCGTTCACCA TGGCGCGCAG CGAACTGCGC
CGGACCTGGC TGTATCGCAT TCGCCCGTCC GCCCTGCACC CGCGCTTTGA ACGGCTGGCG
CGTCAGCCAC TGAACGGGCC GCTGGGCGGC GTCACCCCCA ATCGCCTGCG TTGGAACCCT
CAACCGCTCC CAACTGAACC GACTGACTTC ATCGAAGGCT GGCTGCCGAT GGTGGCCAAT
TCGGCTGCGG ACAAACCGGC GGGGGTGAGT GTCTATATCT ACTGCGCCAA CCGCTCGATG
GAACGGGTGT TCTTCAACGC TGACGGTGAA CTGCTGATAG TGCCGGAGCA GGGCCGCCTG
CGCATCGCCA CTGAGCTGGG GCTGCTGGAG GTCGAGCCGC AGGAAATCGC CGTGGTACCG
CGCGGCATGA AGTTTCGCGT CGAACTGCCT GATGGCCAGG CCCGGGGCTA CATTGCCGAG
AACCACGGCG CGCCGTTGCG CCTGCCGGAC CTGGGTCCGA TCGGCAGCAA CGGGCTGGCC
AACCCCCGAG ACTTCCTGGC CCCGGTAGCG CACTACGAGG AGGCTGAAGG CCCGGTACAG
CTGGTGCAGA AGTTTCTGGG TGAACACTGG GCCTGCGAGC TGCAGCACTC ACCACTGGAC
GTGGTCGCCT GGCACGGCAG TAACGTGCCC TACAAGTATG ACCTGCGTCG TTTCAACACC
CTCGGCACGG TCAGCTTCGA TCACCCCGAT CCGTCGATCT TCACCGTATT GACGTCACCG
ACCAGCGTGC ATGGTCTGGC CAACATGGAC TTCGTGATCT TCCCTCCGCG CTGGATGGTG
GCCGAGAACA CCTTCCGTCC ACCGTGGTTC CACCGCAACC TGATGAACGA ATTCATGGGC
CTGATCAGCG GTGCCTACGA TGCCAAGGCC GAAGGTTTCC TGCCCGGTGG CGCTTCGCTG
CACGGTGTAA TGAGCGCCCA CGGGCCCGAT GCCGAGACCT GCGAAAAAGC CATTGCCGCC
GACCTCGCAC CGCACAAGAT CGACAACACC ATGGCCTTCA TGTTCGAGAC CAGCCAGGTG
CTGCGCCCGA GCCTGCAGGC GCTCGAGTGC CCGCAGTTGC AGGCCGACTA CGATAGTTGC
TGGGCCACCT TGCCGAGCAC CTTCAACCCG AACCGGAGAT AA
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| Protein sequence | MNRDTSPDLQ YLSGFGNEFA SEALPGALPV GQNSPQKAPY GLYAELLSGT AFTMARSELR
RTWLYRIRPS ALHPRFERLA RQPLNGPLGG VTPNRLRWNP QPLPTEPTDF IEGWLPMVAN
SAADKPAGVS VYIYCANRSM ERVFFNADGE LLIVPEQGRL RIATELGLLE VEPQEIAVVP
RGMKFRVELP DGQARGYIAE NHGAPLRLPD LGPIGSNGLA NPRDFLAPVA HYEEAEGPVQ
LVQKFLGEHW ACELQHSPLD VVAWHGSNVP YKYDLRRFNT LGTVSFDHPD PSIFTVLTSP
TSVHGLANMD FVIFPPRWMV AENTFRPPWF HRNLMNEFMG LISGAYDAKA EGFLPGGASL
HGVMSAHGPD AETCEKAIAA DLAPHKIDNT MAFMFETSQV LRPSLQALEC PQLQADYDSC
WATLPSTFNP NRR
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