Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0815 |
Symbol | |
ID | 6109732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 906786 |
End bp | 907706 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620579 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001747689 |
Protein GI | 170720001 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGC CGGTACGTCT GCAAGACCGT GTGGTGATCG TCACAGGGGC CGGTGGTGGC CTGGGCCGCG CCCATGCACT GCTGTTCGCC GCGCGTGGCG CCAAGGTGGT GGTCAACGAT CTTGGGGGGT CTACCCACGG GGAAGGCGCC AGCGCTTCAG CGGCCGATCG GGTTGTCGAT GAGATCTGCG CCGCTGGAGG CATGGCTGTG GCCAATCACG ACTCCGTTGG TGACGGCGCA CGCATCGTCG AACAGGCGCT GGACTGTTTT GGGCGGGTCG ATGTGCTGGT GAACAATGCC GGCATCCTGC GCGACAAGAC CTTCCACAAG ATGGACGACA GCGATTGGGA TCAGGTTTAC CAAGTCCATG TCGAGGGCGC CTACAAGGTC ACCCGCGCTG CCTGGCCCCA TTTACGCGAG CAGAACTGGG GGCGGGTGAT CTTCACCGCT TCGACCTCTG GGATCTATGG CAACTTCGGC CAGGCCAATT ACGGCATGGC CAAGCTTGGC TTATATGGCT TGACCCGTAC CCTGGCCATC GAAGGGCGCA AACACGGCGT GTTGGTCAAT GCCATCGCGC CTACCGGTGG CACGCGCATG ACCGAAGGGC TGATACCGGC ACAGGTGTTC GAACGCCTCA AGCCTGAACT GGTCAGCCCC CTGGTGGTTT ACCTGGGTAG CGAGCAGTGT CAGAGCAGCG GTGAGCTGTT CGAGGTGGGC GGGGGCTGGA TTGGCAAGGT GCGCTGGGAG CGTAGCCTGG GTGTCGGCTT CGACCCGAGG GAAGGTTTTA GCCCTGAGCA GGTGGCTGAC AGCTGGGCGC AGATTGGTGA TTTCGCTGAG GCGATACACC CGCAGGACAG CTTGCAGGCG TTGCAGCAGA TGATGGCGAA CCTGCAGCAG TATCCGCTGC AGCGTCCTTG A
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Protein sequence | MSEPVRLQDR VVIVTGAGGG LGRAHALLFA ARGAKVVVND LGGSTHGEGA SASAADRVVD EICAAGGMAV ANHDSVGDGA RIVEQALDCF GRVDVLVNNA GILRDKTFHK MDDSDWDQVY QVHVEGAYKV TRAAWPHLRE QNWGRVIFTA STSGIYGNFG QANYGMAKLG LYGLTRTLAI EGRKHGVLVN AIAPTGGTRM TEGLIPAQVF ERLKPELVSP LVVYLGSEQC QSSGELFEVG GGWIGKVRWE RSLGVGFDPR EGFSPEQVAD SWAQIGDFAE AIHPQDSLQA LQQMMANLQQ YPLQRP
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