Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0794 |
Symbol | |
ID | 6109711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 884965 |
End bp | 886398 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641620558 |
Product | DNA repair protein RadA |
Protein accession | YP_001747668 |
Protein GI | 170719980 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACGC GCTCGAGACA CGCCTGCGTC GGCTATCATG GCGATTTTTT CCAGGAGACC CTGCCCATGG CCAAGGCCAA GCGCTTGTAT GGCTGCACTG AGTGTGGCGC GACCTTTCCC AAATGGGCCG GCCAGTGTGG CGAATGCGGT GCCTGGAACA CCCTGGTCGA AACCATGATC GAGAGCGGCG GCGCAGCGGC ACCCAGCGGT CGCGCCGGCT GGACCGGGCA ACAGGCGCAG ATCAAGACCC TGGCCGAAGT CAGCGTCGAG GAAATTCCGC GGTTCACCAC CAGCAGCACC GAACTCGATC GCGTGCTGGG CGGCGGCCTG GTCGACGGCT CGGTGGTGTT GATCGGTGGT GATCCGGGCA TCGGCAAATC GACCATTCTG CTGCAGACCT TGTGCAACAT TGCTGTGGGC ATGCCGGCGC TGTATGTCAC CGGCGAGGAG TCGCAGCAGC AGGTGGCCAT GCGTTCACGC CGCCTGGGGC TGCCCCAGGA CCAGCTCAAA GTGATGACCG AGACCTGTAT TGAAACGATC ATCGCTACGG CGCGTCAGGA AAAGCCCCGG GTCATGGTCA TCGATTCGAT CCAGACGATC TTCACCGAGC AATTGCAATC AGCGCCTGGC GGTGTTGCTC AGGTGCGCGA AAGTGCGGCA TTGCTGGTGC GCTACGCCAA GCAGAGCGGC ACGGCGATCT TCCTTGTCGG CCATGTCACC AAGGAAGGCT CGCTGGCGGG CCCGCGGGTG CTGGAACACA TGGTCGACAC CGTGTTGTAT TTCGAGGGTG AGTCCGATGG CCGCTTGCGC TTGTTGCGCG CGGTGAAGAA CCGCTTTGGT GCGGTCAATG AATTGGGTGT CTTCGGTATG ACCGACCGTG GGCTCAAAGA GGTTTCCAAC CCTTCGGCGA TCTTCCTCAA CCGGGCTCAG GAAGAAGTAC CGGGCAGCGT GGTCATGGCC ACGTGGGAAG GTACCCGGCC GATGCTGGTA GAGGTACAAG CGCTGGTCGA TGACAGCCAC CTGGCCAACC CGCGACGTGT CACCCTGGGC CTGGACCAGA ACCGTTTGGC CATGTTGCTG GCGGTGCTGC ACCGCCATGG TGGTATTCCC ACCCATGACC AGGACGTGTT TCTCAATGTC GTCGGTGGGG TGAAGGTCCT TGAAACCGCG TCGGATCTGG CCTTGTTGGC TGCGGTGATG TCCAGCCTGC GCAACCGGCC GTTGGCCCAT GGGCTGCTGG TATTTGGCGA GATTGGTTTG TCGGGCGAGG TACGGCCGGT TCCCAGTGGG CAGGAGCGCC TGAAAGAAGC GGCGAAACAT GGCTTCAAGC GGGCCATCGT GCCCAAGGGC AACGCACCGA AGGAATCACC GGCGGGGCTG CAGGTGATCG CAGTAACCCG GCTGGAGCAA GCTCTGGACG CCTTGTTCGA ATAA
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Protein sequence | MPTRSRHACV GYHGDFFQET LPMAKAKRLY GCTECGATFP KWAGQCGECG AWNTLVETMI ESGGAAAPSG RAGWTGQQAQ IKTLAEVSVE EIPRFTTSST ELDRVLGGGL VDGSVVLIGG DPGIGKSTIL LQTLCNIAVG MPALYVTGEE SQQQVAMRSR RLGLPQDQLK VMTETCIETI IATARQEKPR VMVIDSIQTI FTEQLQSAPG GVAQVRESAA LLVRYAKQSG TAIFLVGHVT KEGSLAGPRV LEHMVDTVLY FEGESDGRLR LLRAVKNRFG AVNELGVFGM TDRGLKEVSN PSAIFLNRAQ EEVPGSVVMA TWEGTRPMLV EVQALVDDSH LANPRRVTLG LDQNRLAMLL AVLHRHGGIP THDQDVFLNV VGGVKVLETA SDLALLAAVM SSLRNRPLAH GLLVFGEIGL SGEVRPVPSG QERLKEAAKH GFKRAIVPKG NAPKESPAGL QVIAVTRLEQ ALDALFE
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