Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0776 |
Symbol | |
ID | 6109693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 865835 |
End bp | 866731 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641620540 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001747650 |
Protein GI | 170719962 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.580459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAACCC GATCCGAAGA ACTCCAGGTA TTCGTCGCCG TTATCGACTG CGGCTCGATT TCCGCTGCCG CCGAGCAACT GGGCCAGACC CCATCGGCGG TCAGCCGCAC GTTGTCGCGC CTGGAGGCAA AGCTGGGCAC TACGCTGGTC AATCGCACCA CCCGGCGCAT GGACCTGACC GAAGAAGGGC GCTTCTTCCT TGAACGCTCA CGGCTGGTGC TCGAGCAGAT GGATGATATG GAAGAGCGCC TGTCGATGAA CCGCCAGACG CCTTCCGGGC GCCTGCGCAT CAACGCCGCA GCGCCGTTCA TGCTGCACGC GATCCTGCCG TGGATCGGCG AATTCCGCAG CCAGTACCCC GACATCGAGT TGGAGCTGAA CACCGATGAC CTGATCATCG ACCTGCTGGA GCAGAGCACC GACGTGGCGA TCCGCATCGG TGAGCTGGCC GACTCCAGCC TGCACGCGCG TTCGCTGGGC TGCAGCCCGG TGCAGGTACT GGCAAGTCCG GCGTACCTTG AGCGGCACGG TACACCGCAG CATGTCGAAG ACCTGAACCA TCACTGCCTG CTCGGCTTCA GCCAGCCCGA GTCACTCAAC CAGTGGCCGC TGCGCCATGC CCAGGGCGAC CGCTGGGCGA TCCGCCCGGC GCTGATCGCC TCCAGCGGCG AGACCCTGCG CCAGTTGGCG CTGGCCGGGG AGGGTATCGT CAGCCTGTCG CACTTCATGA CCCACGAGGA CATCCGCGCC GGCCGCCTGC AGGTCATTCT GAGCGCTGCC AACAACGGCT ACCGCCAGCC GATCCACGCT GTTTACTACC GCAACACGCA ACTGGCCCTG CGCATCCAGT GCTTCCTCGA CTTCATCCAG CGCAAACTGG CGATGTACGC CTGCTGA
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Protein sequence | MKTRSEELQV FVAVIDCGSI SAAAEQLGQT PSAVSRTLSR LEAKLGTTLV NRTTRRMDLT EEGRFFLERS RLVLEQMDDM EERLSMNRQT PSGRLRINAA APFMLHAILP WIGEFRSQYP DIELELNTDD LIIDLLEQST DVAIRIGELA DSSLHARSLG CSPVQVLASP AYLERHGTPQ HVEDLNHHCL LGFSQPESLN QWPLRHAQGD RWAIRPALIA SSGETLRQLA LAGEGIVSLS HFMTHEDIRA GRLQVILSAA NNGYRQPIHA VYYRNTQLAL RIQCFLDFIQ RKLAMYAC
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