| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0766 |
|---|
| Symbol | |
|---|
| ID | 6109683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 856766 |
|---|
| End bp | 857782 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641620530 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001747640 |
|---|
| Protein GI | 170719952 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.207763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCTTT TTTCGAGTAT AGATGTGCAA ACATCCAACA AGAACGCACA AAAAAACCGG
ATCAACATGC AAAAAGATCT CACCTCCCTG AGCGCGCTCA ACTGGGACGA CCTGAAGTTT
TTCCTCGAAG TGGCCCGCAC CCGCAAGGCC AGCAGCGCCG CCAAACGCCT GAGCGTGGAC
TACACCACGG TGTCGCGGCG CATCAGCTCG CTGGAGGGGG CGCTGGGCAC GTTGCTGTTC
GAAAAATCGC GGACCAACGG CTTTGTCCTC ACCGCCGAGG GCCAGCGCTT GCTGGGTTAT
GCCGAGTCGA TCGAAAGCAC GCTGCACATG GCCTGCGAGC AGGTGTCCGG GTCGGGCGTG
GCATTGTCGG GCCATGTTCG CATGGGCTGT ACCGAAGGCT TCGGCAGCTT TTTCGTTACC
CCACAGTTGA GCCATTTCGT CGATGCCTAC CCGGCGATAT CAGTGGATAT CCTGCCGCTG
CCACACTTCA TCAGCCTCTC CAAACGCGAG GCGGACATCG TCATCGCCCT GGAGCGGCCC
GAGCATGGGC CTTATGTGTG CTGCAAGCTG TGCGACTATC GGCTGAGGCT GTATGCGACC
CAGGATTACC TGGACGACCA TGCGCCGATC AACCAGGTCA GCGACCTGAT TGGCCATCCG
TTCATCAGCT ATGTGGATGA CCTGGCGTTC AGCTCAGAGC TGCTGTACCT GGCCAACCTG
ATTCCCAACG CCAGCGCGCA TCTTCGCAGT ACCAGCGTGA TTGCACAGTA CACGGCGGCG
TTGCAGGGGC GAGGGTTGGC GATCTTGCCG TGTTTTCTGG CGGCGCAGGA TGCGCGATTG
GTCACGGTGT TGCCTGAGGA GATCGAGGTG ACGCGGCAAT TCTGGATGTA TTGCCGGGAG
GATTTGCGCA AGTTGAAGCG CATTACCCTG CTGTGGGATT ACATTCGTGG GGTGACGGAG
GCGAATGCGC CTTTGTTGAT GGGGCAAACG CGCGAGATGC GTTTCGCTCA GGAGTAA
|
|---|
| Protein sequence | MGLFSSIDVQ TSNKNAQKNR INMQKDLTSL SALNWDDLKF FLEVARTRKA SSAAKRLSVD
YTTVSRRISS LEGALGTLLF EKSRTNGFVL TAEGQRLLGY AESIESTLHM ACEQVSGSGV
ALSGHVRMGC TEGFGSFFVT PQLSHFVDAY PAISVDILPL PHFISLSKRE ADIVIALERP
EHGPYVCCKL CDYRLRLYAT QDYLDDHAPI NQVSDLIGHP FISYVDDLAF SSELLYLANL
IPNASAHLRS TSVIAQYTAA LQGRGLAILP CFLAAQDARL VTVLPEEIEV TRQFWMYCRE
DLRKLKRITL LWDYIRGVTE ANAPLLMGQT REMRFAQE
|
|---|
| |