| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0764 |
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| Symbol | |
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| ID | 6109681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 854883 |
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| End bp | 856157 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620528 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001747638 |
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| Protein GI | 170719950 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.52083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.111389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTAA GCAGAAAAAA AAGGGGCGTT CGCCCGACCC TGCGCTCGGT CCTGAGCCGG
GGTCACCTCA GCGTCGCCGT GCTGGCCGTC GGCCTTGCCG GTATCTCACT GACCGTGCTG
GGTGTGCTTG CCTTGCGTGT GTACGCCAAC CACAACTTGC ACTTGATCGC CCGCTCGATC
AATTACACCG TCGAAGCCGC CGTGGTGTTC GACGACAGTG GCGCGGCCAA CGAGGCCTTG
GAGCTGATTG CCAGAACCGA AGAGGTGGCC GATGCCAAGG TTTTCAACAA TGACGGTGAG
CAATTGGCGC ATTGGCAGCG CAACGACGAC GGCATGCTCG CGCACTTGGA AGCGCAAGTG
GCAAGGGCCT TGCTGAATGA GCCCATCAAC CTGCCGATCA TGCACCAGCA ACAGAAGGTC
GGGCACATCG AACTGATCGG CCAAGGCCGC AGCCTGCTGG TGTTCCTGCT CAGCGGCCTG
GGCGGCATCC TGTTTTGTAC AGCCCTCAGC GCTTTTGCAG CCCAGTATCT GTCCCGGCGC
ATGCTTGGCG ATATCGTCCG CCCTCTGCGT AGCCTGGCCA GCGTCGCCCA CGCCGCACGT
CGCGAGCGCA GCTTCGACCG CCGTGTGCCG CAAGCGCCGA TTGCCGAACT CAATGAACTG
GGCAATGACT TCAATGCCTT GCTGGACGAA CTGGAAATCT GGCACAGCCA CCTGCAGAAC
GAAAACGCCA CCTTGGCCCA CCAGGCCAGT CATGACAGCC TCACCGGCCT GCACAACCGT
GCTTTCTTCG AGGGCCGCCT CAACCGCAGC GTGCGCAATG CCGCCCGGCA GCAGGACCAT
ATGGCGCTGT TGTTCCTCGA CAGTGACCAC TTCAAGCAGA TCAATGACAA CCTCGGCCAC
GCTGTTGGGG ACCAAGTGCT GATCAACGTT GCCGACCGCG TGCGTGCGCA ACTGCGTGAG
CATGACCTGG TGGCGCGCCT TGGGGGTGAT GAATTCGCCG TGCTGCTGAC GCCGCTGCAG
TCGCGCACAG ATGCTGAACG CATAGCTGAC AAGATCATTA CCAGCATGGC GCTGCCGATT
CAGCTCGACA GCGGGAGCAG CATCACAACC TCGCTCAGCG TAGGTATTGC CTATTACCCG
GAGGATGGCG ACGACCCCGC CACCCTCCTC GACGCCGCTG ATGCGGCGAT GTACCAGGCC
AAGCGCATGC GCCGTGGCCA GTGGCAAGCG GCGCAGACGG AACGGTCCGC CGCTGAAATA
AAGAACAGGA GCTGA
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| Protein sequence | MRVSRKKRGV RPTLRSVLSR GHLSVAVLAV GLAGISLTVL GVLALRVYAN HNLHLIARSI
NYTVEAAVVF DDSGAANEAL ELIARTEEVA DAKVFNNDGE QLAHWQRNDD GMLAHLEAQV
ARALLNEPIN LPIMHQQQKV GHIELIGQGR SLLVFLLSGL GGILFCTALS AFAAQYLSRR
MLGDIVRPLR SLASVAHAAR RERSFDRRVP QAPIAELNEL GNDFNALLDE LEIWHSHLQN
ENATLAHQAS HDSLTGLHNR AFFEGRLNRS VRNAARQQDH MALLFLDSDH FKQINDNLGH
AVGDQVLINV ADRVRAQLRE HDLVARLGGD EFAVLLTPLQ SRTDAERIAD KIITSMALPI
QLDSGSSITT SLSVGIAYYP EDGDDPATLL DAADAAMYQA KRMRRGQWQA AQTERSAAEI
KNRS
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