| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0761 |
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| Symbol | |
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| ID | 6109678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 848468 |
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| End bp | 852139 |
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| Gene Length | 3672 bp |
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| Protein Length | 1223 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620525 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_001747635 |
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| Protein GI | 170719947 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.238035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.093599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGG TCCGTCCCCT GGCACTGAGT TTCCCCCTGC ACGGCAGCCA ACTGATCGAA
GCCAGTGCCG GTACCGGCAA GACGTTCACG ATTTCAGCGC TTTACCTGCG GCTGATCCTC
GGTCATGGCG GCGAGCAAGC TTTTGGCCGC GAGTTGCTGC CACCGCAGAT CCTCGTGGTG
ACTTTTACTG ATGCGGCCAC CAAGGAATTG CGCGAGCGTA TTCGCGCGCG CCTGGCCGAA
GCCGCACGCT TCTTTCGCGG CGAGCTGCAG GAAGCCGACC CGCTGCTGCA CCAGCTACGT
GACGATTACC CACAGGAGCA CTGGCCCCGC TGCGCCAACC GCCTGGAGAT CGCCGTACAG
TGGATGGATG AAGCGGCAGT CTCGACCATT CATGGCTGGT GCCAGCGTAT GCTTCGCGAG
CACGCCTTCG ACAGCGGCAG CCTTTTCACC CAGAGCCTGG AAACCGACCA CAGCGACCTG
CTTGGCCAGG TCATGCGCGA CTATTGGCGT CGTTTCTGCT ACGGCATGCA CGGCGAGGCC
TTAGGCTGGG TTCGTAGCCA TTGGGGCAGC CCCGATGCAC TGTTGCCCAG GATCCGCCCC
CTGTTTGGTC GCTTGCGTGC GCAGCAGGAT GAGCAAGAAC CGCAAGCGCT GATCGATGCA
GCACTGCAGC AGCGCGCCGA TCAGCTGTAC CAACTTAAAG CCCCATGGGT GCAATGGGCC
GAGCAGCTGC AACAGATCTG CCGGGACGCC GTCGCCGCTA AGCTGGCCGA CGGGCGCAAA
CTGCAGGCGC GGTTCTTCGA ACCCTGGTTC GACAAATTAC GCGCCTGGGC TGCAGATGAG
CAGACAGTGG AACTTGACCT TGGGACTGGC TTCACTCGCC TGACTCCAGC AGGCATGGCT
GAAGCCTGGA AGGCCGGTGA GCCTCCAGAT CACCCGGCCC TGCATGCCAT GCAAGACCTG
CCACAACAGC TGCAGGCTCT GGCAAGCCCT GATGCACGCC TGCTTGAGCA CGCCGCCGCC
TGGGTTTCGG CGCGCTTCGA GGTGGAAAAG CGCCGCCGCG CTGAAATGGG CTTCGATGAC
ATGCTGCTGC GCCTGCAACA TGCGTTGGCC AGTGAAGCCG GCGAGAGATT GGCAGGCCTG
ATTCGCGAAC AGTTCCCTGT AGCCCTGATC GACGAATTCC AGGATACCGA CCCGGTTCAA
TACGGCATTT TCGAACGTAT CTACCGCATC AGCGAAAATC GTGAGGAAAC CGGCCTGTTC
ATGATTGGCG ACCCCAAGCA GGCCATCTAT GCCTTCCGTG GCGCCGACAT TTACACCTAC
CTGTCCGCAC GGCGCGCCAC CGCTGGGAGG CTGCACAGCC TGGACACCAA CTACCGTTCC
AGCGAGGCAA TGGTGGCCGC TGTCAACCAG GTGTTCCTGC AGGCTGAAGC CCGTGATCAA
GGGCGGGGCG CCTTCCTGTT CCGCGAAAAC GATGACAACC CGTTGCCGTT CATCGAGGTC
CGCGCCAAGG GGCGCAGCGA ACGCCTGCTG ATCGACGGCC AAGCCATCGC GGCACTGCAG
TGCTGGCAAT TGGAAAGCGA CGAACCCGTC TCCAGCACAC TGTACCGGCA GCAACTTGCG
GCCAGTTGCG CCAGCCACAT CGTCGCCCTG CTCAACAGTG CCCAGCGCGG CCTGAGCGGC
TTCAGCAAGG CTGACGGTGA ACTGCGCCCC TGCCTGCCCT CTGACATCGC CATTCTCGTA
CGTGACGGCC ATGAGGCGCA GTTGGTCCGA AGCGAGCTTG CCTCCCGTGA CGTTCGCAGC
GTGTACCTCT CCGACAAGGA CTCGGTCTTC GCCGCCCAGG AAGCGCTTGA CCTGCTGGCC
TGGCTCAAGG CCTGCGCCGA GCCGGACTCC GAGCGCCTGC TCAAGGCCGC CTTGGCCAGC
CTGACCCTGG AGCTGTCGCT GGCCGAGCTG GACCAGTTGA ACCAGGACGA GCGGGTCTGG
GAAGACTGGG TAATGCGTTT TCGCCGCTAC CGCGACACCT GGCAGCGCCA GGGCGTACTG
CCGATGTTGC GGCACCTGCT GCATGATTTC CAGTTGCCGC GTAGGCTAAT TGCCCGCAGC
GATGGCGAGC GGGTGTTGAC CAACCTGCTG CACCTGGCCG AGCTGCTGCA GCAAGCGGCG
GGTGAACTGG ATGGCGAACA AGCGCTGATC CGCCATCTGG CCGAGCACCT GGCCAACGCC
GGCCAGGCTG GTGAAGACCA GATCCTTCGC CTTGAGAGTG ATGAACAGCT GGTCAAGGTC
GTGACGATCC ACAAGTCCAA GGGCCTGGAA TACCCCTTGG TCTACCTGCC GTTCATCTGC
ACCAGCAAAC CGGTCGACGG TAGCCGCCTG CCGCTGGCCT GGCACGACAG CCAAGGGAAT
GCGCAACTGA CCCTCACCCC CGACCCGGCG CAGATTACCC TGGCCGATGA TGAACGCCTC
GCTGAAGACC TGCGCCTGCT CTACGTGGCC CTCACACGTG CCCAGCACGC ATGCTGGCTG
GGCGTCGCCG ACCTCAAGCG CGGTAACCAG AAAAGCTCGC AGTTGCACCG TTCCGCGCTC
GGCTATCTGC TTGGCGGCGG TGTGCAATTG CAGGGCTCGG CACAACTGAC GGACTGGTTG
CAGAACTTGC TGGCAGGCTG CCCGCACATT GCCTGCCCCG GCCTGCCAGA GGCAGATGAA
GAGCGCTACC GCTCGCCCCA TGCCGAACGC GAGCTGCTGC CTGCACGCAA GCCTCGTCGA
ACTGCGGCGG AGCATTGGTG GATCGCGTCC TACAGCGCCT TGCGGGTGGG GGAACAGACA
CTGGGTGCCG ACAGTTCCCA GGCACAGCAG TTGCTCGACG ATGAGGGGGG CGATGCTCAA
CTGCCCCGTG AGGTGCCCGC CGACAGCGGC GACATTCACC GCTTCCCGCG CGGGCCGAAC
CCCGGCACCT TCCTCCATGG TTTGCTTGAG TGGGCCGGCC GCGAAGGCTT CGCCGAGGTC
GCTGCCAACC CCAAACTGAT CGAGCGCACC GTCGGCCAGC GCTGCAACCG GCGCGACTGG
ACCGGCTGGA TCCCGACACT TAGCCAATGG TTGCAGCAAC TGCTGAACGA GCCACTGCCG
GCCCGTGACA TGAGCCTGAC GTTGGCGCAG TTGCAGCACT ATCAGATAGA AATGGAGTTC
TGGTTCGCCA GCCATCAGGT CGATGCCGAG CAACTGGACC GGTTGGTCGC CCGCCACACC
CATCCAGGCG CAGCTCGCCC CGCTGCTCAG CCGACACTGC TCAACGGCAT GTTCAAAGGC
TTTATCGACC TGGCGTTCGA GCTCGATGGC CGCTACTTCG TAGCCGATTA CAAGTCCAAC
TGGCTTGGCC CGGATATCCA GGCCTATGAC ACGCTAGCCA TGGAAAAGGC GATCCTTGAG
CACCGCTACG ATTTGCAATA TGTGCTTTAT TTGCTGGCCC TGCATCGCCA GCTGCGTGCA
CGGCTGCCCG AATACGATTA CGACCGGCAT GTGGGCGGCG CGCTGTTCAT CTTCTTGCGT
GCGGCCAGCA GCAGCGGCCA CGGCGTTTAC TTCGTCAAGC CGCCACGTGA GTTGATCGAG
GCACTCGATG CGTTGTTCCG TGGCGTTCAC GCGCCTCAAC AACAGGACCT GTTCGCCGGA
GCTGCGCCAT GA
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| Protein sequence | MTQVRPLALS FPLHGSQLIE ASAGTGKTFT ISALYLRLIL GHGGEQAFGR ELLPPQILVV
TFTDAATKEL RERIRARLAE AARFFRGELQ EADPLLHQLR DDYPQEHWPR CANRLEIAVQ
WMDEAAVSTI HGWCQRMLRE HAFDSGSLFT QSLETDHSDL LGQVMRDYWR RFCYGMHGEA
LGWVRSHWGS PDALLPRIRP LFGRLRAQQD EQEPQALIDA ALQQRADQLY QLKAPWVQWA
EQLQQICRDA VAAKLADGRK LQARFFEPWF DKLRAWAADE QTVELDLGTG FTRLTPAGMA
EAWKAGEPPD HPALHAMQDL PQQLQALASP DARLLEHAAA WVSARFEVEK RRRAEMGFDD
MLLRLQHALA SEAGERLAGL IREQFPVALI DEFQDTDPVQ YGIFERIYRI SENREETGLF
MIGDPKQAIY AFRGADIYTY LSARRATAGR LHSLDTNYRS SEAMVAAVNQ VFLQAEARDQ
GRGAFLFREN DDNPLPFIEV RAKGRSERLL IDGQAIAALQ CWQLESDEPV SSTLYRQQLA
ASCASHIVAL LNSAQRGLSG FSKADGELRP CLPSDIAILV RDGHEAQLVR SELASRDVRS
VYLSDKDSVF AAQEALDLLA WLKACAEPDS ERLLKAALAS LTLELSLAEL DQLNQDERVW
EDWVMRFRRY RDTWQRQGVL PMLRHLLHDF QLPRRLIARS DGERVLTNLL HLAELLQQAA
GELDGEQALI RHLAEHLANA GQAGEDQILR LESDEQLVKV VTIHKSKGLE YPLVYLPFIC
TSKPVDGSRL PLAWHDSQGN AQLTLTPDPA QITLADDERL AEDLRLLYVA LTRAQHACWL
GVADLKRGNQ KSSQLHRSAL GYLLGGGVQL QGSAQLTDWL QNLLAGCPHI ACPGLPEADE
ERYRSPHAER ELLPARKPRR TAAEHWWIAS YSALRVGEQT LGADSSQAQQ LLDDEGGDAQ
LPREVPADSG DIHRFPRGPN PGTFLHGLLE WAGREGFAEV AANPKLIERT VGQRCNRRDW
TGWIPTLSQW LQQLLNEPLP ARDMSLTLAQ LQHYQIEMEF WFASHQVDAE QLDRLVARHT
HPGAARPAAQ PTLLNGMFKG FIDLAFELDG RYFVADYKSN WLGPDIQAYD TLAMEKAILE
HRYDLQYVLY LLALHRQLRA RLPEYDYDRH VGGALFIFLR AASSSGHGVY FVKPPRELIE
ALDALFRGVH APQQQDLFAG AAP
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