Gene PputW619_0760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0760 
Symbol 
ID6109677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp844995 
End bp848471 
Gene Length3477 bp 
Protein Length1158 aa 
Translation table11 
GC content62% 
IMG OID641620524 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_001747634 
Protein GI170719946 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0191191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATC CGACTTCACT CCATCCCGGC TTCATGATCG TGCATGGCAA CCGCCTGGAC 
GACTTGCGCA GCCTGGTGGT GAGCTGGATG CGGCGCTATC CGCTGGCCCC CCTGGAAAAC
GAAATCGCCC TGGTACAAAG CAACGGCATC GCCCAGTGGC TCAAGCTGGC TTTGGCCGAG
GACCCGCTCG CAGATGACCA GGGCGGTTGT GGGATCGCTG CTGCCATCGA AGTGCAGTTG
CCGGGCAGCT TCATGTGGCA GCTGTACAGA AAAGTCCTCG GGCGTGACGA GATTCCAGAG
GTTTCTCTGC TCGACAAGGC CCCGCTGACC TGGCGACTCA TGCGTTTGCT GCCAGCGCTG
ATCGAACGCC CGCATTTCGA ACCGTTGCGG CGCTTTCTCA CTGACGACGG TGATCTGCGC
AAACGCTATC AGCTGGCAGA GCGCTTGGCT GACCTGTTCG ACCAGTATCA GGTCTATCGC
GCCGACTGGC TGAAGGACTG GGCTGCCGGG CAGCACGTTC TCAATACGGC CCGTGGCGAA
CGCAAGCCCC TGGCTCCTGG CAACCGCTGG CAGGCCGAGC TGTGGCGGGC CTTGCTCGAG
GATGTAGGTG AACAAGGCAT GGCCCAGAGC CGTGCAGGAG TGCACCAGCG ATTCACCGAA
TGTATCAACA ACCTTGAGCA ACCCCCTGCG GGTCTGCCTT CACGGGTAAT CGTATTCGGT
ATCTCATCTC TGCCTGCCCA AGCGTTGGAA GCACTGGCAG GCCTTGCGCG GTTCAGCCAG
GTATTGTTGT GTGTGCACAA CCCTTGCCGA CATCACTGGT CGGACATCGT TGCCGACAAG
GACCTGCTAC GCCACCAGTA CAAGCGCCAA CAGCGTAAGC AGGGCATGCC CGTGCAACTG
GATGACGAGT CCTTGCATCA GCACGCCCAC CCCTTGCTGG CCGCCTGGGG CAAGCAGGGC
CGCGACTACA TCAACCTGCT CGACAGTTAT GACGACCCAG GCAGCTACCA AGGTGCATTC
AGCGATGGGC GCATCGACCT GTTCAGCGAA ACCGAGCCCG CAACACTGCT CAATCAGCTG
CAGGACGATA TCCTCGAGCT GCGCCCGCTT ACCGAAACCC GTGAGCTGTG GCCTGAGGTC
GATCTGGCAA AAGACCGCTC CGTTCGCTTC CACATCGCCC ACAGTCCACA GCGCGAAGTT
GAGATCCTGC ACGACCAGTT GTTGGCCCGC TTCAGCGCCG ACCCCACCCT GCGCCCGCGC
GACGTCATCG TCATGCTCCC GGCAATCGAC AACTATGCAC CGCATATCCG TGCCGTTTTC
GGCCAGTTAC AGCGCAACGA CCCGCGTTAC ATACCTTTCA CCCTGACCGA TCAGGGCCAG
CGCGGGCGTG ATCCATTGTT GATTGCCCTT GAGCATCTGC TCAAGCTGCC AGACAGTCGT
TTCGCCGTCA GCGAAGTGCT CGATCTCCTG GACGTACCGG CTGTGCGAGG ACGTTTCGGG
ATTCGCGAAA GCGACCTGCC CACGCTGCAC CGCTGGATCG AAGGTGCCGG TATACGTTGG
GGGCTGAATG CCGAGCAGCG AGCGACCCTG GGCCTGCCCG AAGGCCTGGA GCAGAACAGC
TGGAGGTTCG GCCTAAGGCG TATGTTGTTG GGTTATGCCG TCGGTATGGG TGAAGGCTGT
GACGGTATCG AACCCTACGA CGAAATCGGC GGCCTGGATG CTGCGCTGAT CGGCCCGTTG
GTGGCCTTGC TCGACGCTCT CGATGTGGCC AACCATGTCC TCTCTCAGCC AGCCACTGCT
GCCCAGTGGG GCGAGCGACT GAACGCGCTG TTGCAGGTGT TTTTCCTCGC AGAAGGCGAG
CATGACGAAT TCCTGCTCAT GCAACTGCAG GAGCTGCGCG ATAGCTGGCT GGAGGTGTGC
GAGACCGTAG GCTTACAGGA CTTGCTGCCC CTCACGGTCA TACGCGAGGC GTGGTTGTCG
GGCCTGGATC AGGGCAAGCT GTCCCAGCGT TTTCTTGCAG GTTCAGTAAA CTTCTGCACC
CTCATGCCGA TGCGTGCCAT CCCGTTCCGG GTGGTCTGCC TGCTGGGCAT GAATGACGGC
GATTACCCGC GCGCCCAGCA GCCGCTGGAC TTCGACCTGA TGGCCAGTGA CTACCGCCCC
GGCGATCGCT CGCGCCGGGA GGATGACCGT TACCTGCTGC TCGAAGCGTT GTTGTCCGCG
CGCGATCAGC TGTACATCAG CTGGGTCGGC CGGAGCATCC GCGATAATAG CGAGCGCCCG
GCATCCGTAC TCATAGGCCA ACTGCGCGAT CACCTGGCTG CAGGTTGGCG ACTGGCCGGT
AGCGGCGACA GCCAGCAAGC GGGCGAGCAG TTGTTGCATG CGTTGACTCA AGAGCATCCA
CTGCAGCCCT TCAGCCCGCG CTATTTCCAG AAAGGCAGCG CGTTGTTCAG TTATGCCCAT
GAATGGCAGT TGCTGCATCA GGTCGGCGAT GAGGCTAAAC AGTCGGACGT TGGCCTGCCG
CCTTACAGTA GTAATGAAGC CCTTACCCTC ATGCAACTGC AGGATTTTCT GCGTCATCCG
GTGCGACACT TCTTCAGCCA GCGCCTGAAA GTGTTCTTCG AGGCGCTGGA GTCGCCGACG
CCGGATGAGG AGCCGTTCGT CCTCGATGCC TTGCAGCGCT ATAGCGCCAG TGAAAGCCTG
CTCGGCGCGG CGCTGGCCGA ACCGGAAAAC GCCGAGCAGG CGCTGCAAGC CCAGGCGCGC
CGGCTGCAGG CATGCGGGAT GCTGCCCTTG GCCGGGTTCG GCGAGCTTTT GCAGGCAGAG
CTGATTCAGC CGCTGCCCGA CCTGCTGCAA CGCCATCGCC ACTTGCTGCA GCGCTGGCCC
GCTTTGGTCG AGGGCGCACT GCCGATCCAT TTCGAGCATG GCGGCCATCG CCTGGAGGGT
TGGCTTGGCC GGGTGTATCA GGCCGACGAC CAAAGCCTGT TGAGCATCAC CACGGTGCCC
AACACCATCA GCGCCGGGCG TAACAGCCTC AAGTGGCACC GGTTGATCGC CAGCTGGGTC
ATGCACCTGG CGGCGTGCGC CGAAGGCTAT CCGCTGCATA GCGCCCTGTT GGCCAGCGAC
ATCACTCTGC TGCTCGCGCC ACTGCCACAA CACGAAGCTG CCGAGCAGCT CGGCCATCTG
CTGGTGTCAC GCCAGGCCGC AATGAATGCG CCGCTGCCGG TTGCCGCCAA GACAGCGTTC
GCCTGGCTGG CCCAGGACGA TCCTGACAAA GCCCTCGCCG CAGCGGCCCG TGCTTACGAA
GGTGATGGCC GCACCAGTTT CGGTGAGCGC AGCGAAAGCC CGGCCCTGGC CCGACAGTTC
CGTGACTTCG CCGCACTCAG TGCCGACGAA ACCTTTGAAG GCTGGTGCGA AACCCTGTAC
CGCCCGTTAT TCAGCGCAGC CTGGCAGACG CTGGGCAACC CGGAGAGTGG CGCATGA
 
Protein sequence
MANPTSLHPG FMIVHGNRLD DLRSLVVSWM RRYPLAPLEN EIALVQSNGI AQWLKLALAE 
DPLADDQGGC GIAAAIEVQL PGSFMWQLYR KVLGRDEIPE VSLLDKAPLT WRLMRLLPAL
IERPHFEPLR RFLTDDGDLR KRYQLAERLA DLFDQYQVYR ADWLKDWAAG QHVLNTARGE
RKPLAPGNRW QAELWRALLE DVGEQGMAQS RAGVHQRFTE CINNLEQPPA GLPSRVIVFG
ISSLPAQALE ALAGLARFSQ VLLCVHNPCR HHWSDIVADK DLLRHQYKRQ QRKQGMPVQL
DDESLHQHAH PLLAAWGKQG RDYINLLDSY DDPGSYQGAF SDGRIDLFSE TEPATLLNQL
QDDILELRPL TETRELWPEV DLAKDRSVRF HIAHSPQREV EILHDQLLAR FSADPTLRPR
DVIVMLPAID NYAPHIRAVF GQLQRNDPRY IPFTLTDQGQ RGRDPLLIAL EHLLKLPDSR
FAVSEVLDLL DVPAVRGRFG IRESDLPTLH RWIEGAGIRW GLNAEQRATL GLPEGLEQNS
WRFGLRRMLL GYAVGMGEGC DGIEPYDEIG GLDAALIGPL VALLDALDVA NHVLSQPATA
AQWGERLNAL LQVFFLAEGE HDEFLLMQLQ ELRDSWLEVC ETVGLQDLLP LTVIREAWLS
GLDQGKLSQR FLAGSVNFCT LMPMRAIPFR VVCLLGMNDG DYPRAQQPLD FDLMASDYRP
GDRSRREDDR YLLLEALLSA RDQLYISWVG RSIRDNSERP ASVLIGQLRD HLAAGWRLAG
SGDSQQAGEQ LLHALTQEHP LQPFSPRYFQ KGSALFSYAH EWQLLHQVGD EAKQSDVGLP
PYSSNEALTL MQLQDFLRHP VRHFFSQRLK VFFEALESPT PDEEPFVLDA LQRYSASESL
LGAALAEPEN AEQALQAQAR RLQACGMLPL AGFGELLQAE LIQPLPDLLQ RHRHLLQRWP
ALVEGALPIH FEHGGHRLEG WLGRVYQADD QSLLSITTVP NTISAGRNSL KWHRLIASWV
MHLAACAEGY PLHSALLASD ITLLLAPLPQ HEAAEQLGHL LVSRQAAMNA PLPVAAKTAF
AWLAQDDPDK ALAAAARAYE GDGRTSFGER SESPALARQF RDFAALSADE TFEGWCETLY
RPLFSAAWQT LGNPESGA