| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0754 |
|---|
| Symbol | |
|---|
| ID | 6109666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 833134 |
|---|
| End bp | 834858 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641620513 |
|---|
| Product | acetolactate synthase 3 catalytic subunit |
|---|
| Protein accession | YP_001747628 |
|---|
| Protein GI | 170719940 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000000260145 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCTTT TATCTGGCGC TGAGATGGTC GTCCGCTTCT TGCGTGACGA AGGCGTTAAG
CACATCTACG GGTACCCTGG TGGTGCTCTC CTGCATGTTT ACGACGCCCT GTTCAAAGAA
CCGGAAGTCG AGCACATCCT GGTTCGTCAC GAGCAGGCTG CTACCCATAT GGCGGACGGC
TACGCCCGCG CCACCGGCAA GGCCGGTGTG GTGCTGGTAA CCTCCGGCCC GGGCGCGACC
AATGCCATCA CCGGTATTGC CACCGCTTAC ATGGACTCGA TTCCGATGGT CATCCTGTCC
GGCCAGGTGC CTAGCACCAT GGTGGGTACC GATGCCTTCC AGGAAACCGA CATGATCGGT
ATCTCGCGGC CGATCGTGAA GCACAGCTTC ATGATCAAAC ACGCTACCGA GATCCCTGAA
GTTCTGAAAA AAGCCTTCTA TCTGGCGCAA TCCGGCCGTC CTGGCCCGGT CGTGGTCGAC
ATCCCAAAAG ATATGACCAA CCCGGCCGAG AAGTTCGAAT ACGTCTATCC GAAGAAGGTC
AAGCTGCGCT CCTACAGCCC GGCAGTGCGT GGCCACTCCG GCCAGATCCG CAAGGCTGCC
GAGATGCTGC TGGCTGCCAA ACGTCCGATC GTCTATGCCG GTGGGGGTGT GATTCTAGGT
GGTGGCTCCG AAGCGCTGAC CGAAATTGCC AAGTCGCTGA ACCTGCCAGT CACCAATACC
CTGATGGGCC TTGGCGGCTT CCCGGGTACC GACCGCCAGT TCCTCGGCAT GCTCGGTATG
CACGGCAGCT ACACCGCCAA CATGGCCATG CACAATGCCG ATGTGATTTT CGCGGTCGGC
GCGCGCTTCG ATGACCGCGT GGTCAATGGT CCGGCCAAGT TCTGCCCGAA TGCCAAGATC
ATTCACATCG ACATCGACCC GGCGTCGATC TCCAAGATGA TCAAGGCCGA CGTGCCGATC
GTGGGCCCGG TCGACAGCGT GCTGAGCGAG ATGCTCGGCA TCCTCAAGGA AATCGGCGAG
CAGCCAGACA AGACCGCGGC CGAAGCCTGG TGGAAGCAGA TCGACGAGTG GCGCGGTAAT
GGCGAACTGT TCCCCTACAA CAAGGGCGAC GGCAGCGTCA TCAAGCCACA GACCGTCATC
GAGACCCTGT GCGAAGTGAC CAACGGCGAT GCTTTCGTCA CCTCCGACGT CGGTCAGCAC
CAGATGTTCG CGGCGCAGTA CTACCGCTTC AACAAGCCGA ACCGCTGGAT CAACTCCGGT
GGCTTGGGCA CCATGGGCTT CGGTTTCCCT GCGGCTATGG GCATCAAGCT CAACTTCCCG
GATCAGGACG TGGCCTGCGT GACTGGCGAA GGCAGCATCC AGATGAACAT CCAGGAACTG
TCCACCTGCA TGCAGTACGG CCTGCCGGTG AAGATCGTCA ACCTGAACAA CGGCGTGCTG
GGCATGGTCC GTCAGTGGCA GGACATGGCC TACAACGGCC GTCACTCGCA CTCCTATGTC
GAGTCGCTGC CTGACTTCAT CAAGCTGGCC GAGGCCTATG GCCATGTGGG TATCCGCATC
ACCAGCCTGA AGGACCTAAA GCCGAAGCTC GAAGAAGCCT TCGCGATGAA GGACCGCCTG
GTGTTCATCG ACATCGCGGT CGACCGTACC GAGCACGTCT ATCCGATGCA GATCAAGGAT
GGCTCGATGC GTGACATGTG GCTGAGCAAG ACGGAGCGTA CCTGA
|
|---|
| Protein sequence | MELLSGAEMV VRFLRDEGVK HIYGYPGGAL LHVYDALFKE PEVEHILVRH EQAATHMADG
YARATGKAGV VLVTSGPGAT NAITGIATAY MDSIPMVILS GQVPSTMVGT DAFQETDMIG
ISRPIVKHSF MIKHATEIPE VLKKAFYLAQ SGRPGPVVVD IPKDMTNPAE KFEYVYPKKV
KLRSYSPAVR GHSGQIRKAA EMLLAAKRPI VYAGGGVILG GGSEALTEIA KSLNLPVTNT
LMGLGGFPGT DRQFLGMLGM HGSYTANMAM HNADVIFAVG ARFDDRVVNG PAKFCPNAKI
IHIDIDPASI SKMIKADVPI VGPVDSVLSE MLGILKEIGE QPDKTAAEAW WKQIDEWRGN
GELFPYNKGD GSVIKPQTVI ETLCEVTNGD AFVTSDVGQH QMFAAQYYRF NKPNRWINSG
GLGTMGFGFP AAMGIKLNFP DQDVACVTGE GSIQMNIQEL STCMQYGLPV KIVNLNNGVL
GMVRQWQDMA YNGRHSHSYV ESLPDFIKLA EAYGHVGIRI TSLKDLKPKL EEAFAMKDRL
VFIDIAVDRT EHVYPMQIKD GSMRDMWLSK TERT
|
|---|
| |