| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0751 |
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| Symbol | |
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| ID | 6109663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 829268 |
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| End bp | 831589 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620510 |
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| Product | penicillin-binding protein 1B |
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| Protein accession | YP_001747625 |
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| Protein GI | 170719937 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.288465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000000686308 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCGAA CCCGAAATTC CCGAACTCCT AAGAAACGCC CGACCGGCCG CTCGCGCGCC
TGGCTGGGCT GGGCGTTGAA GCTCAGCCTG GTCGGCCTGG TGATCATTGC CGGCTTCGCG
GTTTACCTCG ATGCTGTCGT CCAGGAGAAG TTCTCCGGCA AGCGTTGGAC CATCCCTGCC
AAGGTGTACG CCCGGCCGCT GGAGCTGTTC GTCGGCCAGA AGCTGAGCAA GAACGACTTC
CTCACCGAAC TCGATGCCCT CGGCTACCGG CGTGAAAGCG CGGCCAATGG CCCGGGCGCT
GCGGCTGTCA ACGGTAACAC CGTCGACCTC AACACCCGCG GCTTCCAGTT TTACGAGGGT
ATGGAACCCG CGCAGTTCGT GCGTGTGCGC TTCTCCGGCG ACTACGTTGC CGGGCTGTCC
GGCGCCAACA ATGGCAAGCT GGATGTGGTG CGCCTCGAGC CGTTGATGAT CGGGGGCATC
TACCCGAAGA ACCTTGAGGA CCGCATCCTG ATCAAGATCG ATCAGGTGCC GCCGTACTTG
CTCGAAACCC TGGTGGCAAC GGAAGACCGA GACTTCTATA GCCACTTCGG CGTGTCGCCC
AAGTCCATCG CTCGCGCAAT CTGGGTCAAT ACTTCCGCCG GTACCATGCG CCAGGGTGGC
AGTACCCTGA CCCAGCAGTT GGTGAAGAAC TTCTACCTGA CCAGCGAGCG CACACTCAGC
CGCAAGCTGA CCGAAGCGAT GATGGCCGTA CTGCTGGAGA TGCACTACGA CAAGCGTGAA
ATTCTCGAGG CCTACCTCAA CGAGGTATTC GTCGGCCAAG ATGGGCAGCG CGCCGTGCAT
GGGTTTGGCC TGGCCAGCCA GTTCTTCTTC AGCCAACCGC TGTCGGAACT CAAATTGCAC
CAGATCGCCC TGTTGGTGGG TATGGTCAAA GGGCCGTCCT ACTACAACCC GCGTCGCCAC
CCCGAACGGG CTCTGGCGCG GCGTAACCTG GTCCTGGACC TTGTGGCCGA GCAGGGCGTT
GCGAGCCAGG AAGCGGTCGA TGCGGCGAAG AAGATGCCGC TGGGCGTGAC CAAGCGAGGC
AGCCTGGCCG ACAGTTCGTT CCCGGCCTTC CTCGACCTGG TCAAGCGTCA GCTGCGCCAG
GACTATCGCG ATGAAGACTT GACTGAAGAG GGCCTGCGCA TCTTCACCAG TTTCGACCCG
ATCCTGCAGA TGAAGGCCGA AACCTCGATG AATGAGACCT TCAAGCGTCT GTCAGGGCGC
AAAGGCGCTG ACGAGGTCGA GTCGGCGATG GTCGTGACCA ACCCGGAAAC AGGTGAGGTG
CAGGCGCTTA TCGGCAGTCG TCAGGCCGGA TTCGCCGGCT TCAACCGTGC CATCGATGCC
GTGCGGCCGA TTGGCTCGCT GGTCAAACCG GCGGTGTATC TGACCGCGCT GGAGCAGCCG
AGCAAGTACA CCCTTACCAG TTGGGTGCAG GACGAGGCGT TTTCGGTCAA GGGCGCCAAT
GGCCAAGTGT GGCGCCCGCA AAACTATGAC CGCCGCCCGC ATGGCACCAT TTACCTGTAC
CAGGGGCTGG CCAACTCCTA CAACCTGTCG ACCGCCAAGA TCGGCCTGGA AGTGGGTGTG
CCCAACGTCA TCAAGACCAT CGGCCGGCTC GGGGTCAATG TCGACTGGCC AGCGTTCCCG
GCAATGCTGC TGGGGGCTGG TGGCATGTCG CCGATGCAAG TGGCGACCAT GTACCAGACC
ATCGCCAATG GCGGTTTCAA TACGCCGATG CGCGGTATCC GCAGTGTGCT CACCGCCGAA
GGTGAGCCGC TCAAGCGTTA CCCGTTCCAG ATCCAGCAGA CCTTCGATCC GGGCTCCATC
TACCTGGTAC AGAACGCGAT GCAGCGGGTG ATGCGCGAAG GTACCGGCCG CTCCGTGTAC
AACGTGCTGC CCAGGTCGCT GACCCTGGCG GGCAAGACCG GTACCAGTAA CGACTCGCGT
GACAGCTGGT TCTCAGGCTT CAGCCAGGAC CTGCTGGCGG TGGTGTGGAT GGGCCGAGAC
GATAACGGCA AGACACCGTT CACCGGTGCC ACTGGCGCAC TGCAGGTGTG GACCAGCTTC
ATGAAGAAGG CTGACCCGCT GCCGCTGGAC ATGCCGCAAC CGGACAACGT TGTACAGGCC
TGGATCGACC CCTACAGTGG GCAGGGTTCC GACGCAAGCT GTCCGGGAGC GGTGCAGATG
CCGTATATTC GCGGGAGCGA ACCGCCCGCC GGCGCGATCT GTGGCGGCGA GCAGAATCCG
GCAGAATCGG TCATGGACTG GGTCAAAGGC TGGATGAATT AA
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| Protein sequence | MTRTRNSRTP KKRPTGRSRA WLGWALKLSL VGLVIIAGFA VYLDAVVQEK FSGKRWTIPA
KVYARPLELF VGQKLSKNDF LTELDALGYR RESAANGPGA AAVNGNTVDL NTRGFQFYEG
MEPAQFVRVR FSGDYVAGLS GANNGKLDVV RLEPLMIGGI YPKNLEDRIL IKIDQVPPYL
LETLVATEDR DFYSHFGVSP KSIARAIWVN TSAGTMRQGG STLTQQLVKN FYLTSERTLS
RKLTEAMMAV LLEMHYDKRE ILEAYLNEVF VGQDGQRAVH GFGLASQFFF SQPLSELKLH
QIALLVGMVK GPSYYNPRRH PERALARRNL VLDLVAEQGV ASQEAVDAAK KMPLGVTKRG
SLADSSFPAF LDLVKRQLRQ DYRDEDLTEE GLRIFTSFDP ILQMKAETSM NETFKRLSGR
KGADEVESAM VVTNPETGEV QALIGSRQAG FAGFNRAIDA VRPIGSLVKP AVYLTALEQP
SKYTLTSWVQ DEAFSVKGAN GQVWRPQNYD RRPHGTIYLY QGLANSYNLS TAKIGLEVGV
PNVIKTIGRL GVNVDWPAFP AMLLGAGGMS PMQVATMYQT IANGGFNTPM RGIRSVLTAE
GEPLKRYPFQ IQQTFDPGSI YLVQNAMQRV MREGTGRSVY NVLPRSLTLA GKTGTSNDSR
DSWFSGFSQD LLAVVWMGRD DNGKTPFTGA TGALQVWTSF MKKADPLPLD MPQPDNVVQA
WIDPYSGQGS DASCPGAVQM PYIRGSEPPA GAICGGEQNP AESVMDWVKG WMN
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