Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0729 |
Symbol | |
ID | 6109641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 802270 |
End bp | 805206 |
Gene Length | 2937 bp |
Protein Length | 978 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641620488 |
Product | hypothetical protein |
Protein accession | YP_001747603 |
Protein GI | 170719915 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0010551 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTACAAAG GATTGACTCG CGCCCTGGGC GCCCTGTTGG CTCTCGTGGC CCTCTACAGC CTGCTTGGCT TCCTCATCGT TCCTGGCGTT GCCCTGCGCA TCGCCAACCA GCAGTTGGCG CAATACGCCA CACTGCCGGC GAACCTTCAG CGTATCGAGC TCAACCCGTT CAGCCTCGAG CTGACGCTGT GGGGCCTGCA GATCGGCGAA CCGGGCAAGG AACAGGTAGG TTTTGAGCGG CTCTATGCGA ACCTTGCGCT CGACAGCCTG TGGAGCGGCG CCCTGCACCT GCAGGCGATC GAACTCGACA AACCCCGAAA CGAAGTGCTG TTCGCCAAGG ACGGCACGCT CAACCTCACC CAACTGTTCA AGCTGCCAGC CAGCGAACCC AAGCCTGAAG AGCCTGCATC CGACCCGTTC CCCTTACGCA TCGGCAGCAT CAAGCTCAGC GCAGGCTACC TGCACTTTGC CGACCAGCGC CCAAGCGAGC CGATCGAGTT CATCTACGAC GACATGAACC TGGAGCTTAA GAACCTCAGC ACGTTACCGG ACGACAACGC TGACATGACG TTGGTGGCAT TGGGCCCTAA CGGTGGGCGC ATCGACTGGA ACGGCACCTT GAGCCTTGCG CCAATCGCTT CAAAGGGCAC ACTGAAAATC ACCGACGGCA AGATGAAGCT GTTCTGGCCC TACGTTCGCG ATGCCGTGCC GCTGGTGCTG GAGGACGGCG TGGTCAACCT CGACACGCAC TACACGCTCA ACCTGTCCAA GGAAACCGAG CTGCTGCTGG ACAACACCTC GGTACGTGTC GCGCCATTCG CCATAAAGGC GCCAGATGGC CGCCCACTGG TGCGCCTGGC AAGCCTCGAT GTCAGCGAAA CCAGCATCGA CCTGGCCAAA CAGCTGGTTA CCGTGGGCAA GATCCGCAGT GAAAAACTGG AAACCTGGGC CGCCCTGGAG CAGGACGGCC AACTCGACTG GCAGAAACTC TTCGCCAGCG AGCCGGCCAA GCCCACCCCG ACGGAAAAGG CAGAGCCGGC CGCCGCCGAA CCGGCTCCCG ACGACAAAGC AGCCAAGGAA CCGGGCAAGC CATGGCAAGT GCTACTCAAG GACGTTCAGC TGCGCAATTA TCAGGTGCAC CTGGCCGACC GTAGCCAGAA AGAACCGGTT GCGCTGGACG TTGGGCCTCT GAACGTCGAC CTTCAGGGCT TCGACAGCCT CAACCAGTCG CCCTTCACCC TCAAGCTCGA CACCGGCATT GGCAAGCAGG GCAAACTGCA GGCCAGTGGC GAGGTCAACC TGGCGCCGGT CAGCGCCAGG CTCGATGTCA GCACACGCGA CATCGATTTG CGTATTGCGC AGGCCTATAT CAGCCCGTTC ATCCGCCTGG AGCTGCGTAG CGGCATGCTT GCCAGCGACC TCAAGGTCGA CCTCAAAGGC ACCGAGCCAC TGGCCTTCAC CGTGGCCGGC AAGGCGCAGG TCAACCAGTT GCACACCCTG GACACCATCA AAAACCGCGA CTTCGTCAAA TGGCAACAGG TGAATGTGGA CGGCCTGGCC TATGTGCACG GTGACGCCCT GTCGATCGAC AAGGTAACCC TGCTGCAGCC TTATGCGCGC TTCATCATCA ACGAAGACCG CACCACCAAT GTCGATGACC TGCTGATCCC GCAGCCTGCC GATGGCCCCG TGCAAAGCCA AGCCAAGCCG GCCAGCACCC CGGGCAGCAA ACCGCTGGGC ATCCGCATCG GGCAGATCAG CATCAACGAT GGTTCAGCAA ACTTTGCCGA CCTCACCCTG ACACCTAACT TCGCCACGGC GGTGCAACAG CTCAACGGCC AGATCGGCAC CATCGACAAC CGCAAGCCGG CGCCGGCCAA GGTCGACATC AAGGGCAAGG TCGACCGTTA TGCACCGGTC ACCATCAAAG GCGCGCTCAA CCCGTTCAAC CCGATGGCAA GCCTGGATAT CGCCACCAGC TTCAAACGTG TCGAGCTGAC CACGCTGACG CCCTATTCTG GCAAGTTCGC CGGCTTCCGT ATCCGCAAGG GCCGTCTGAA CCTCGACCTG CACTACCTGA TCACCAATGG CCAATTGAAG GCCGAGAACA AGCTGGTGGT CGAGCAATTG CAGCTGGGTG AGAAGGTCGA TAGCCCGGAT GCAGTCGACC TGCCCATCCG CCTGGCGGTC GCGCTGCTTA AAGACACCGA GGGCAAGATC TCGATCGAGC TGCCCGTGAC CGGCGACCTC AACAACCCGC AGTTCAGCGT AATGCCTATC GTCTGGCAGA CATTGCGCAA CCTGGTACTG CGTGCAGCGC AGGCACCGTT CAAGTTCATC GGCGGGTTGA TTGCCGGCGG CGGCTCGCAA GACCTCGGCA ACGTATCGTT CGCCCCAGGT TCCAGCGAGC TCAGTGGCGA TGCGCAATCG GCCCTGAACA AACTCGCCTC GGCCCTCAAA GAGCGCCCCG AACTGCGCCT GGAAATCGAG GGCACCAGTG CCCAGAGCAG TGATGGCCCA CTGCTCGCTC AGCAGCGCCT GGAGCGGGAG TATCAGGCCA CCTGGTACAA GATCCTGCAA CGCCGTGGCG ATAAGGTTCC GGCCAACGCC TCCATGCTGG TGGTCGACGA CAGCGACAAA CCGGCCATGC TCGAAGGCAT CTACCGTACC CGTCTGAAAC AGCAACCGCC GGCCGACTGG GAACAGCTGA GCCGCGAGGA GCGCACCGCC AGGCTGCGCG AGGCGGTAAT CAAATCATGG GCCGAAAGTG CCGCATTGCT GCGCACGCTG GGCCAGGAGC GGGCCAGCAG TATCAAGGAC TACCTGGTCG ACAAGGGCAA GCTTGAGGAT GACCGGGTGT ATTTCATTGA TACAAGCCTT GGACAGGCTG AAAAAGATGG CCGGGTGATT ACGCCGATGC ATCTGGATGC TGAGTAA
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Protein sequence | MYKGLTRALG ALLALVALYS LLGFLIVPGV ALRIANQQLA QYATLPANLQ RIELNPFSLE LTLWGLQIGE PGKEQVGFER LYANLALDSL WSGALHLQAI ELDKPRNEVL FAKDGTLNLT QLFKLPASEP KPEEPASDPF PLRIGSIKLS AGYLHFADQR PSEPIEFIYD DMNLELKNLS TLPDDNADMT LVALGPNGGR IDWNGTLSLA PIASKGTLKI TDGKMKLFWP YVRDAVPLVL EDGVVNLDTH YTLNLSKETE LLLDNTSVRV APFAIKAPDG RPLVRLASLD VSETSIDLAK QLVTVGKIRS EKLETWAALE QDGQLDWQKL FASEPAKPTP TEKAEPAAAE PAPDDKAAKE PGKPWQVLLK DVQLRNYQVH LADRSQKEPV ALDVGPLNVD LQGFDSLNQS PFTLKLDTGI GKQGKLQASG EVNLAPVSAR LDVSTRDIDL RIAQAYISPF IRLELRSGML ASDLKVDLKG TEPLAFTVAG KAQVNQLHTL DTIKNRDFVK WQQVNVDGLA YVHGDALSID KVTLLQPYAR FIINEDRTTN VDDLLIPQPA DGPVQSQAKP ASTPGSKPLG IRIGQISIND GSANFADLTL TPNFATAVQQ LNGQIGTIDN RKPAPAKVDI KGKVDRYAPV TIKGALNPFN PMASLDIATS FKRVELTTLT PYSGKFAGFR IRKGRLNLDL HYLITNGQLK AENKLVVEQL QLGEKVDSPD AVDLPIRLAV ALLKDTEGKI SIELPVTGDL NNPQFSVMPI VWQTLRNLVL RAAQAPFKFI GGLIAGGGSQ DLGNVSFAPG SSELSGDAQS ALNKLASALK ERPELRLEIE GTSAQSSDGP LLAQQRLERE YQATWYKILQ RRGDKVPANA SMLVVDDSDK PAMLEGIYRT RLKQQPPADW EQLSREERTA RLREAVIKSW AESAALLRTL GQERASSIKD YLVDKGKLED DRVYFIDTSL GQAEKDGRVI TPMHLDAE
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