| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0725 |
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| Symbol | |
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| ID | 6109637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 798557 |
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| End bp | 800662 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641620484 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001747599 |
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| Protein GI | 170719911 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.959792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0305384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCGG TAATCAAGAA ATTCCAGTTC GGTCAATCGA CCGTTACTCT CGAAACGGGC
CGCATTGCCC GTCAGGCAAC CGGCGCCGTG CTGGTTACCG TCGACAACGA TGTCACCGTG
CTGGTGACCG TGGTCGGTGC CAAGCAGGCC GATCCAGGCA AGGGCTTCTT CCCTCTGTCG
GTCCACTACC AGGAAAAGAC CTACGCCGCC GGCAAGATCC CGGGTGGCTT CTTCAAGCGC
GAAGGCCGTC CTTCCGAGAA AGAGACGCTG ACCTCGCGCC TGATCGACCG TCCGATCCGC
CCGCTGTTCC CTGAAGGCTT CATGAACGAA GTCCAGGTCG TCTGCACCGT GGTATCGACC
AGCAAGAAGA CCGATCCGGA CATCGCTGCG ATGATCGGTA CCTCGGCTGC GCTTGCCATC
TCCGGCATCC CATTCGAAGG CCCGATCGGC GCTGCCCGTG TTGCCTTCCA CGAAAGCACC
GGCTACCTGC TGAACCCGAC TTACGAGCAG CTGGCCGCCT CGAGCCTGGA CATGGTCGTT
GCCGGTACTT CCGACGCCGT GCTGATGGTT GAATCGGAAG CCCAAGAGCT GACCGAAGAC
CAGATGCTGG GCGCTGTACT GTTCGCCCAC GACGAATTCC AGGCCGTTAT CCAGGCTGTC
AAAGAGCTGG CTGCCGAAGC TGGCAAGCCG ACCTGGGACT GGAAACCTGC CGTTGCCAAC
ACCGAGCTGT TCAACGCCAT TCGCGCTGAA TTCGGCGAAG CCGTTTCGCA GGGCTACACC
ATCACCGTCA AGGCCGACCG CTACGCGCGC CTGGGCGAGC TGCGTGACCA GGCGATCGCC
AAGTTCTCCG GTGAAGAAGG CCAGCCATCG GCCAGCGAAG TAAAAGAAAT CTTCGGTGAG
ATCGAATACC GCACCGTTCG CGAAAACATC GTCAACGGCA AGCCGCGTAT CGATGGTCGT
GACACCAAGA CCGTTCGCCC GCTGAACATC GAAGTCGGCG TTCTGCCGAA GACGCACGGT
TCGGCACTGT TCACCCGTGG TGAAACCCAG GCCCTGGTCG TCGCGACCCT GGGTACTGCC
CGTGACGCCC AGCTGCTGGA CACCCTCGAA GGCGAGAAGA AAGACCCCTT CATGCTGCAC
TACAACTTCC CGCCGTTCTC GGTGGGCGAG TGTGGTCGCA TGGGCGGTGC TGGCCGTCGT
GAAATCGGTC ACGGCCGCCT GGCCCGCCGC TCGGTCCAGG CCATGCTGCC TGCCGCTGAC
GTGTTCCCGT ACACCATCCG TGTGGTGTCG GAAATCACCG AGTCCAACGG TTCCAGCTCC
ATGGCGTCGG TCTGCGGTGC TTCCCTGGCA CTGATGGATG CCGGTGTACC GATGAAGGCA
CCGGTAGCCG GTATCGCCAT GGGCCTGGTC AAGGAAGGCG AGAAGTTCGC AGTCCTGACC
GACATCCTGG GTGACGAAGA CCACCTGGGC GACATGGACT TCAAGGTTGC CGGTACTGCC
AAAGGCGTTA CCGCACTGCA GATGGACATC AAGATCAACG GCATCACCGA AGAGATCATG
GAGATCGCCC TGGGCCAGGC CCTGGAAGCG CGCCTGAACA TCCTCGGCCA GATGAACCAG
ATCATTGGCC AGTCGCGTAC CGAGCTGTCG GCCAACGCCC CGACCATGAT CGCGATGAAG
ATCGACACCG ACAAGATTCG TGACGTCATC GGTAAAGGCG GCGCCACCAT TCGCGCCATC
TGCGAAGAGA CCAAGGCTTC GATCGATATC GAAGACGATG GCTCGATCAA GATCTTCGGC
GAAACCAAAG AAGCTGCAGA GGCAGCGCGT CAGCGCGTTC TGGGCATCAC CGCTGAAGCC
GAGATCGGCA AGATCTACGT GGGCAAGGTC GAGCGTATCG TCGACTTCGG CGCCTTCGTC
AACATCCTGC CTGGCAAGGA CGGCCTGGTA CACATCTCCA TGCTCAGCGA TGCGCGCGTA
GAGAAAGTGA CCGATATCCT GAAAGAAGGT CAGGAAGTCG AAGTGCTGGT ACTGGACGTG
GACAACCGCG GCCGTATCAA GCTGTCGATC AAAGACGTTG CCGCGGCCAA GGCCTCGGGC
GTCTAA
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| Protein sequence | MNPVIKKFQF GQSTVTLETG RIARQATGAV LVTVDNDVTV LVTVVGAKQA DPGKGFFPLS
VHYQEKTYAA GKIPGGFFKR EGRPSEKETL TSRLIDRPIR PLFPEGFMNE VQVVCTVVST
SKKTDPDIAA MIGTSAALAI SGIPFEGPIG AARVAFHEST GYLLNPTYEQ LAASSLDMVV
AGTSDAVLMV ESEAQELTED QMLGAVLFAH DEFQAVIQAV KELAAEAGKP TWDWKPAVAN
TELFNAIRAE FGEAVSQGYT ITVKADRYAR LGELRDQAIA KFSGEEGQPS ASEVKEIFGE
IEYRTVRENI VNGKPRIDGR DTKTVRPLNI EVGVLPKTHG SALFTRGETQ ALVVATLGTA
RDAQLLDTLE GEKKDPFMLH YNFPPFSVGE CGRMGGAGRR EIGHGRLARR SVQAMLPAAD
VFPYTIRVVS EITESNGSSS MASVCGASLA LMDAGVPMKA PVAGIAMGLV KEGEKFAVLT
DILGDEDHLG DMDFKVAGTA KGVTALQMDI KINGITEEIM EIALGQALEA RLNILGQMNQ
IIGQSRTELS ANAPTMIAMK IDTDKIRDVI GKGGATIRAI CEETKASIDI EDDGSIKIFG
ETKEAAEAAR QRVLGITAEA EIGKIYVGKV ERIVDFGAFV NILPGKDGLV HISMLSDARV
EKVTDILKEG QEVEVLVLDV DNRGRIKLSI KDVAAAKASG V
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