| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0720 |
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| Symbol | nusA |
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| ID | 6109632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 792414 |
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| End bp | 793895 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641620479 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001747594 |
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| Protein GI | 170719906 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0992944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG AAGTACTGCT GGTTGTTGAA TCGGTATCCA ACGAAAAAGG TGTACCGCCC
GGCGTCATTT TCGAAGCGCT GGAAGTGGCT TTGGCTACTG CAACCAAAAA ACGTTTTGAA
GACGAAGTCG ACCTGCGTGT GGAAATCAAC CGCCACACCG GTAGCTACGA GACCTTCCGT
CGCTGGACCG TGGTCGACGA AGCCGATCTG GATGATCCGG CAATCGAGAC CTGGCTGGCC
AAGATTCACG AGACTCACCC TGAAGCCAAA GTGGGTGACG TGATCGAGGA GAAGATCGAG
TCCATCGAAT TCGGTCGTAT CGCCGCCCAG ACCGCCAAGC AGGTCATCGT GCAGAAGGTC
CGTGAGGCCG AGCGCGCCCA GGTGGTCGAT GCCTACCGCG AACGCGTTGG CGAGATCATC
TCCGGTACTG TCAAGAAGGT TACCCGCGAC AACGTCATCG TCGACCTGGG CAACAACGCC
GAGGCGCTGC TGGCTCGCGA AGACATCATT CCACGTGAGA CCTTCCGGGT TGGCGTGCGC
TTGCGTGCGC TGCTCAAGGA AATCCGCACC GAGAACCGCG GTCCGCAGCT GATCCTGTCG
CGCACCGCGC CACAGATGCT GATCGAACTG TTCCGCATCG AGGTGCCGGA AATCGCAGAA
GGCCTCATCG AAGTCATGGC CGCTTCCCGT GATCCGGGAT CGCGTGCCAA GATCGCCGTC
CGCTCCAAGG ACAAGCGCAT CGATCCGCAG GGTGCCTGTA TCGGCATGCG CGGTTCGCGC
GTCCAGGCCG TATCCGGCGA GCTGGGTGGC GAGCGTGTGG ATATCGTCCT GTGGGACGAG
AACCCGGCGC AATTTGTCAT CAACGCCATG TCGCCGGCTG AAGTCGCGGC GATCATCGTT
GACGAAGATG CCCATGCCAT GGACATCGCC GTTGCCGAGG ACAACCTGGC CCAGGCCATT
GGCCGTGGTG GTCAGAACGT TCGCCTGGCC AGTCAGTTGA CCGGCTGGAC CCTGAACGTG
ATGACCGAGA AGGACATCCA GGCCAAGCAG CAGGCGGAAA CCGGTGACAT CCTGCGCAAC
TTCATCGAGG AACTGGAAGT CGACGAGGAG CTGGCCCAAG TGCTGGTCGA CGAAGGCTTT
ACCAGCCTCG AAGAAATTGC CTACGTACCG TTGGAAGAAA TGCTCAACAT CGATGGCTTT
GACGAGGATA TCGTCAATGA GCTCCGCGCT CGAGCCAAGG ACCGTTTGTT GACCAAGGCC
ATCGCTACCG AAGAAAAACT GGCAGACGCC CATCCGGCCG AAGACCTGCT CTCCCTTGAG
GGCATGGACA AGGACCTGGC GGCGGAACTG GCGGTGCGCG GCGTGGTTAA CCGCGAAGAC
CTGGCCGAGC AGTCGATTGA CGACCTGCTC GACATCGACG GCATCGACGA AGAGCGTGCC
GGCAAGTTGA TCATGGCCGC CCGAGCCCAC TGGTTCGAGT AA
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| Protein sequence | MSKEVLLVVE SVSNEKGVPP GVIFEALEVA LATATKKRFE DEVDLRVEIN RHTGSYETFR
RWTVVDEADL DDPAIETWLA KIHETHPEAK VGDVIEEKIE SIEFGRIAAQ TAKQVIVQKV
REAERAQVVD AYRERVGEII SGTVKKVTRD NVIVDLGNNA EALLAREDII PRETFRVGVR
LRALLKEIRT ENRGPQLILS RTAPQMLIEL FRIEVPEIAE GLIEVMAASR DPGSRAKIAV
RSKDKRIDPQ GACIGMRGSR VQAVSGELGG ERVDIVLWDE NPAQFVINAM SPAEVAAIIV
DEDAHAMDIA VAEDNLAQAI GRGGQNVRLA SQLTGWTLNV MTEKDIQAKQ QAETGDILRN
FIEELEVDEE LAQVLVDEGF TSLEEIAYVP LEEMLNIDGF DEDIVNELRA RAKDRLLTKA
IATEEKLADA HPAEDLLSLE GMDKDLAAEL AVRGVVNRED LAEQSIDDLL DIDGIDEERA
GKLIMAARAH WFE
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