| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0717 |
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| Symbol | tpiA |
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| ID | 6109627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 790331 |
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| End bp | 791086 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641620474 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_001747591 |
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| Protein GI | 170719903 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.119458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCGCC CCATGGTAGC TGGTAACTGG AAGATGCACG GTACCCGCGC CAGCGTCGCT
GAGCTGACTC AGGGCTTGGG CAATATGCTC ATTCCCGAAG GTATCGAAGT CGCGGTTTTT
CCTCCGGCCC TGTTCATCAA TGAAGTCATT GATGGTCTCA AAGGCAAAGG AATCACCGTT
GGAGCACAGA ATTCTGCAGT ACAGCCCGAA CAGGGTGCGC TGACTGGTGA AGTTGCACCG
AGTCAGTTGG CTGAAGTGGG TTGCAAGTTT GTGTTGATTG GTCACTCCGA GCGTCGCCAG
GTTATCGGTG AAAGTGAAGA AGTGCTTAAT CGCAAGTTTG CAGCTGCTCA GAAAAGTGGT
TTGACGCCGG TGCTCTGCAT AGGGGAAACT CTGGAGGAGC GCGAAGCAGG CAAGACGCTC
GAAGTTGTAG GGCGTCAACT AAGCAGTGTT ATCGACGCGT TCGGTATTGC CGCTTTTGCC
AATGCAGTAA TTGCCTATGA GCCTGTATGG GCCATCGGTA CAGGTTTGAC GGCCTCGCCG
CAGCAAGCTC AGGATGTGCA TGCAGCCATC CGTAAGCAGT TGGCAGCGAA GGACGCCGAA
GTTGCGCAGA ATGTGCAGCT TCTCTACGGC GGTAGCGTGA AGGCGGCCAA TGCGGCCGAA
CTGTTCGGCA TGCCGGATAT TGATGGGGGG CTCATTGGTG GAGCATCCCT GAACGCAGAC
GAATTCGGTG CAATTTGTCG CGCCGCAGGA AACTGA
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| Protein sequence | MRRPMVAGNW KMHGTRASVA ELTQGLGNML IPEGIEVAVF PPALFINEVI DGLKGKGITV
GAQNSAVQPE QGALTGEVAP SQLAEVGCKF VLIGHSERRQ VIGESEEVLN RKFAAAQKSG
LTPVLCIGET LEEREAGKTL EVVGRQLSSV IDAFGIAAFA NAVIAYEPVW AIGTGLTASP
QQAQDVHAAI RKQLAAKDAE VAQNVQLLYG GSVKAANAAE LFGMPDIDGG LIGGASLNAD
EFGAICRAAG N
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