Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0697 |
Symbol | |
ID | 6109607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 769323 |
End bp | 770090 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641620454 |
Product | GntR domain-containing protein |
Protein accession | YP_001747571 |
Protein GI | 170719883 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.601248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000378938 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTTTTG ATCAGGTCCG CCAGCGGCGC CTGTCCGACG ACATCGTCGA TCGGTTGGAA GGGATGATTC TCGAAGGCAC GTTGACCTCA GGCCAACGGC TGCCGGCCGA GCGTGCCCTG GCCGAGCAGT TCGGTGTGTC GCGCCCCTCA CTGCGCGAGG CGATCCAGAA GCTGGTGGCC AAGGGGCTGT TGGTCAGCCG GCAGGGTGGC GGTAACTATG TGGCCGAATC GCTCGGCTCA ACCTTCAGTG ACCCATTGCT GCAACTGCTG GAGCACAGCG CCGAGGCGCA GCGCGATTTG CTGGAGTTCC GTCACACCCT GGAGGCGTCA TGCGCCTACT ACGCTGCCCA GCGCGCCACC GAGCCAGATC GGGCGCGCCT CAAGGCTGCA TTCGACACCC TGCAGGACTG TTATGCGCGG GCTGACCAGG TCACGCGTGC AGAGGAGGGC GCGGCGGATG CGCGATTCCA CCTGGCGATT GCCGAAGCCA GCCACAATGC GGTGCTGCTG CATACCATTC GCGGGCTGTT CGACCTGCTA AAGCGCAACG TGGTGACCAA CATCGGGGGC ATGTACCAGC AGCGTACCGA GACGCGGGAC ATGCTGATCA GCCAGCACCG TGAGTTGTAC CAGGCGATTG TCGAGGGCAG GGCGGATGAT GCGCGGGAGG TGTCCAGCCG GCACATTCTG TATGTGCAGG AGGTGCTGGA AGAGGCGCAG AACGAAGCCC AGCGCGTAGC GCGGGCAGAG CGGCGCAGCG GGCGCTGA
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Protein sequence | MVFDQVRQRR LSDDIVDRLE GMILEGTLTS GQRLPAERAL AEQFGVSRPS LREAIQKLVA KGLLVSRQGG GNYVAESLGS TFSDPLLQLL EHSAEAQRDL LEFRHTLEAS CAYYAAQRAT EPDRARLKAA FDTLQDCYAR ADQVTRAEEG AADARFHLAI AEASHNAVLL HTIRGLFDLL KRNVVTNIGG MYQQRTETRD MLISQHRELY QAIVEGRADD AREVSSRHIL YVQEVLEEAQ NEAQRVARAE RRSGR
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