| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0694 |
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| Symbol | |
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| ID | 6109604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 763303 |
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| End bp | 766113 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641620451 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001747568 |
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| Protein GI | 170719880 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000000209119 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTGC CCGCCGCATT CCTGCGTGAT GCCGAGCGCC TGATACCCGC CGATCGCCGT
TTCGACGACG CCACGTCCAC CCTGGCCTTT GGCACCGACG CCAGTTTCTA CCGGCTGATC
CCCAAGCTGG TCGTGCGCGT GGAGTCGGAA GACGAAGTGG TCGGGCTGCT GCAACTGGCC
CAGCGCGAAC GCGTGCCGGT GACCTTCCGC GCCGCGGGCA CCAGCCTGTC CGGCCAGGCT
ATCAGTGACT CAGTGCTGAT CGTGCTCGGC GATAACTGGG GCAACAAGGA GATCCGTGGC
CAGGGCGAAC AGATCCGCCT GCAACCCGGG GTTATCGGTG CCCAGGCCAA CGCCTGGCTG
GCCCCTTACG GGCGCAAGAT CGGCCCGGAC CCGGCCTCGA TCAATGCCTG CAAGATCGGC
GGCATCGTTG CCAACAACGC CAGCGGCATG TGCTGCGGCA CCGCACAGAA CACCTACCAC
ACCCTGGCCG GCCTGCGCCT GGTGCTGGCT GACGGCACGC GCCTGGACAG CGAAGACCCG
GGCAGCGTTG CCGCCTTTGA AAGCAGCCAC GCCGACCTGC TCGAAGCGCT GGCCCGGCTT
GGCCGCGAAA CCCGCGCCAA CACCGCACTG GCAGAGCGCA TCCGGCACAA GTACCGGCTG
AAGAACACCA CCGGCTTGTC GCTCAACGCC CTGGTGGATT ACGACAAGCC CCTGGATATC
CTCCAGCATT TGCTGGTTGG GTCTGAAGGT ACGCTGGGCT TCATCAGCGC CGTCACCTAC
AACACCGTGC CCGATCACCC GCACAAGGCC AGCGCGCTGC TGGTGTTCCC CAGCGTGGAA
AGCTGCTGCC GCGCGGTGAC CGTGCTCAAG CGCCAGCCGG TGTCCGCCGT GGAGCTGCTC
GACCGCCGCA GCCTGCGTTC GGTGCAAAAC ATGCCGGGCA TGCCGCTGTG GGTAAAAGGC
CTGTCGGGCA ATGCCTGCGC GCTGCTGATC GAGTCCCGGG CTGCCAGCCA GAGCCTGCTG
CACGAACAAC TACAACAGGT CATGGCCTCT ATCGCCGAAT ACCCGCTGGA ACAGAAAGTC
GACTTCAGCG AAGACCCGGC GGTGTACAAC CAGCTGTGGA AGATCCGCAA GGACACCTTC
CCCGCCGTCG GCGCCGTGCG CCAGACCGGC ACCACGGTGA TCATCGAAGA CGTCACCTTC
CCCGTCGAGC AACTGGCCGA AGGCGTCAAT CGCCTGATCC AGCTGTTCGA CAAGCACCAC
TACGACGAAG CGATCATTTT CGGCCATGCG CTGGAGGGCA ACCTGCACTT TGTCTTCACC
CAGGGTTTCA ACAGCGCGCA AGAAGTCGCG CGCTACCAGG CTTTCATGGA TGACGTGGCG
CAACTGGTGG CCGTGGAGTT CGGCGGCTCG CTCAAGGCCG AGCACGGCAC CGGCCGCAAC
ATGGCGCCGT TCGTGGAGCT GGAATGGGGG CATGACGCCT ATCAGCTGAT GTGGACGCTC
AAGCGCCTGC TCGACCCCAA CGGCATCCTC AACCCCGACG TGGTGTTGAG CGAAGACCCG
GACATTCACC TGAAAAACCT CAAGCCGCTG CCTGCCGCCG ACGAGATCGT CGACAAATGC
ATCGAGTGCG GCTTCTGCGA GCCGGTCTGC CCCTCCAAAG GCCTGACCCT CAGCCCACGC
CAGCGCATCG TCATGTGGCG TGACATTCAG GCGAAAAAAC GCGCCGGCAT CGATACCCGC
GCACTGCTGC AGACTTACCA GTACCAAGGC ATCGACACCT GCGCCGCCAC CGGCCTGTGC
GCCCAGCGCT GCCCGGTGGG CATCAATACC GGCGAGCTGG TGAAGAAGTT GCGCAGCCAG
GCCGCCGAGC ATGCAAAGAC CGCCGACTGG CTGGCCGAGC ACTTCTCTAC TGCACTGGGC
GGCGCCCGCC TGACCCTGAC CGCCGCCAAC ACCGCCCGCA AGCTGCTCGG CGCCCCGCGC
CTGGGCCGCC TGAGTGCGTC GTTGAGCAAG GCCAGCAACG GCCGCCTGCC GCAATGGTCC
CCCGCCATGC CGCAGCCGTT GCGCAGCATC GATTTCGGCC CAGCGAGCAA CGATGCCCGG
CCACGGGTGG TGTACCTGGC GGCTTGCGTG TCACGGGTGA TGGGCCCGGC CTATGCCGAC
CGCGAGCAAA GCTCACTAAT GGACAAGACC CGCGCCCTGC TGGAAAAGGC CGGTTACCAG
GTGGTGTTCC CCGGCAACGC CGACAGCCTG TGCTGCGGGC AGCCGTTCGC GTCCAAAGGC
TACCCCGAGC AAGCGGAGCA CAAGCGCCAG GAGCTGATCA ACGCGCTGCT GCACGCAAGC
CGCGGCGGCC TCGACCCCAT CTACTGCGAC ACCAGCCCCT GCACCCTGCG CCTGGTGCAG
GACCTGGGCG ACACCCGCCT GGACCTGTAC GACCCGGTGC GCTTCATCCG CACCCACCTG
CTGGACAAGC TGGAGTTCAC CCCACAAAAC GAACCGGTGG CGGTGCACGT GACCTGCAGC
ACCCAGCACC TGGGTGAAAG CCAGGCGCTG ATCGACCTGG CGCGGCGCTG CAGCACGCAA
GTGGTGATCC CGGAAGGGAT TCACTGTTGC GGGTTTGCCG GTGACAAGGG CTTTACCACA
CCAGAGCTAA ATGCCCACTC ACTGCGCAGC CTGAAGGACG CAGTGCAGTA TTGCAGTGAA
GGGATTTCCA CCAGCCGGAC CTGTGAGATC GGGTTGTCCA GCCACAGCGG AATCGATTAC
CACGGGCTGG TCTACCTGGT GGATCGCGTC ACCCGCCCAC GCACCCTCTG A
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| Protein sequence | MSLPAAFLRD AERLIPADRR FDDATSTLAF GTDASFYRLI PKLVVRVESE DEVVGLLQLA
QRERVPVTFR AAGTSLSGQA ISDSVLIVLG DNWGNKEIRG QGEQIRLQPG VIGAQANAWL
APYGRKIGPD PASINACKIG GIVANNASGM CCGTAQNTYH TLAGLRLVLA DGTRLDSEDP
GSVAAFESSH ADLLEALARL GRETRANTAL AERIRHKYRL KNTTGLSLNA LVDYDKPLDI
LQHLLVGSEG TLGFISAVTY NTVPDHPHKA SALLVFPSVE SCCRAVTVLK RQPVSAVELL
DRRSLRSVQN MPGMPLWVKG LSGNACALLI ESRAASQSLL HEQLQQVMAS IAEYPLEQKV
DFSEDPAVYN QLWKIRKDTF PAVGAVRQTG TTVIIEDVTF PVEQLAEGVN RLIQLFDKHH
YDEAIIFGHA LEGNLHFVFT QGFNSAQEVA RYQAFMDDVA QLVAVEFGGS LKAEHGTGRN
MAPFVELEWG HDAYQLMWTL KRLLDPNGIL NPDVVLSEDP DIHLKNLKPL PAADEIVDKC
IECGFCEPVC PSKGLTLSPR QRIVMWRDIQ AKKRAGIDTR ALLQTYQYQG IDTCAATGLC
AQRCPVGINT GELVKKLRSQ AAEHAKTADW LAEHFSTALG GARLTLTAAN TARKLLGAPR
LGRLSASLSK ASNGRLPQWS PAMPQPLRSI DFGPASNDAR PRVVYLAACV SRVMGPAYAD
REQSSLMDKT RALLEKAGYQ VVFPGNADSL CCGQPFASKG YPEQAEHKRQ ELINALLHAS
RGGLDPIYCD TSPCTLRLVQ DLGDTRLDLY DPVRFIRTHL LDKLEFTPQN EPVAVHVTCS
TQHLGESQAL IDLARRCSTQ VVIPEGIHCC GFAGDKGFTT PELNAHSLRS LKDAVQYCSE
GISTSRTCEI GLSSHSGIDY HGLVYLVDRV TRPRTL
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