Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0674 |
Symbol | |
ID | 6109583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 733645 |
End bp | 734232 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641620431 |
Product | tail collar domain-containing protein |
Protein accession | YP_001747548 |
Protein GI | 170719860 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.855114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.003962 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCCGT TTCTCGGTGA GATCAAGATG TTCGCAGGCA ACTTCGCGCC TCGCGGTTGG GCATTCTGCC AAGGTCAGCT GATGAGCATT GCCCAGAACA ACGCTTTGTT CGCGCTGCTT GGCACTACGT ATGGCGGCGA TGGCAAGACC ACTTTCGCCC TGCCAGACCT GCGCGGTCGC GGGCCAATCG GTTTCGGCAC CGGGCCAGGC CTGGCCGATG TGGTGCAGGG CGAAGCTGGC GGTGTCAACG ATGTCACGCT GTTGCAGTCG AACATGCCGA TGCAGCAGGC GGTGATCCCT GCCCAGACCG TTTCGGTGGC CATACCGGCG GTGGAGGGCG ATGCCAACGC TGCGGCACCT TCGTCTGGCA ACGTGCTGGC CAAGTCTTTT GACAGTTCGG GGGCAGGGGC GGCGGCGGAT ATCTATTCCA GTGACGTGCC CAACACCAGC CTCAAGCCGT TCAACGTCAC GGTGCCTCAA ACCAGCGTTA ACCTGGGTGG TGCCTCGCTA CCTGTTTCTG TGCAAAACCC CTACCTGGGC ATGAACTTCA TCATCGCCCT GGAAGGCATC TTCCCGAGCC GTAACTGA
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Protein sequence | MDPFLGEIKM FAGNFAPRGW AFCQGQLMSI AQNNALFALL GTTYGGDGKT TFALPDLRGR GPIGFGTGPG LADVVQGEAG GVNDVTLLQS NMPMQQAVIP AQTVSVAIPA VEGDANAAAP SSGNVLAKSF DSSGAGAAAD IYSSDVPNTS LKPFNVTVPQ TSVNLGGASL PVSVQNPYLG MNFIIALEGI FPSRN
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