| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0667 |
|---|
| Symbol | |
|---|
| ID | 6109576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 725437 |
|---|
| End bp | 726831 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641620424 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001747541 |
|---|
| Protein GI | 170719853 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.450649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0171669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG TGGGAACTGA TGGCAACCTT GCACAAGGTT TCAAGCCACG TCATGTAACG
ATGCTGTCCA TCGCGGGCAT CATCGGCGCC GGTCTTTTCG TCGGCTCCGG GCACGCCATC
GCGGCAGCCG GGCCAGCCAC CATTGTTTCT TACTTCGTGG CCGGGACCCT GGTGGTGCTG
GTCATGCGCA TGCTCGGCGA AATGGCCGTG GCGCACCCCG ACACCGGTTC GTTCTCCACC
TATGCCGACC AGGCCATCGG CCGCTGGGCC GGCTACACCA TCGGCTGGCT GTACTGGTGG
TTCTGGGTGC TGGTGATCCC GATCGAAGCA CTGGCCGCCG GGCATGTGCT CAACGCCTGG
TTCCCACAGG TGGACAGCTG GATCTTCGCC CTCGCTTCCG TACTGCTACT GGCGTGCACC
AACCTGTTCA GCGTGGCCAA GTACGGTGAG TTCGAGTTCT GGTTCGCCAT TCTCAAAGTC
ACGGCAATCC TTTGTTTCAT CGGCTTGGGC TTTGCGGCCC TGATGGGCTG GTTGCCCAAC
CGCGAAGTCA GCGGGTTGAG TGGGTTGATG AGCGCCTACG GCGGCTTTGC GCCCAACGGC
TGGTCTGCCG TGATTGGTGC ATTCATCACC GTGATGTTCA GCTTCATCGG CACCGAAGCG
GTGACCATTG CCGCCTCCGA ATCCAGCGAC CCGTCGCGTA ACATCGCCAA GGCCACGCGC
TCGGTGATCT GGCGCATCAG TACCTTCTAC ATCCTGTCGA TCTTCGTGAT CATCTCGATC
GTGCCGTGGA ACGACCCACA GCTTGCGGTG GTGGGTTCTT ACCAGCGGGC GCTGGAAATC
ATGAACATCC CCAATGCCGC CTTCATGGTC GACCTGGTGG TGCTGGTGGC CGTGACCAGC
TGCATGAACT CGTCGATCTA TATCGCTTCG CGGATGATGT ACTCACTGGC CAAGCGCGGT
GATGCACCGG CCTTCCTCAA CAAGACCTCA AAGGTCGGCG TGCCACGCGC TGCCGTGTTC
GGCAGCACCC TGATCGGCGC GGCCATCGCC ATCCTCAACT ACTTCGCACC CAAGGGTGTG
TTCGAGTTCC TGCTGGCCAG CTCCGGCGCC ATTGCGCTGC TGGTTTACAT GGTCATCGCC
ATCTCCCAGC TGCGCATGCG CCGCCGCCTG GAGCGTGAAA ACGCGGAACT GAAATTCCGC
ATGTGGCTGT TCCCTTGGCT GACCTGGGCG GTGATCATTT TCATTGGCGG GGCGCTGGCG
GTGATGATGT ATACGCCCGA GCACCGGGTG GAGGTGACCG CTACATTGAG CCTGGCGATC
TTCATTTCCT TCCTTGGCAT CGTCACCGCG CGCGGTCATG AGCGACAGGC GGCGGGGGTG
CGCTCGCTCG GTTGA
|
|---|
| Protein sequence | MNTVGTDGNL AQGFKPRHVT MLSIAGIIGA GLFVGSGHAI AAAGPATIVS YFVAGTLVVL
VMRMLGEMAV AHPDTGSFST YADQAIGRWA GYTIGWLYWW FWVLVIPIEA LAAGHVLNAW
FPQVDSWIFA LASVLLLACT NLFSVAKYGE FEFWFAILKV TAILCFIGLG FAALMGWLPN
REVSGLSGLM SAYGGFAPNG WSAVIGAFIT VMFSFIGTEA VTIAASESSD PSRNIAKATR
SVIWRISTFY ILSIFVIISI VPWNDPQLAV VGSYQRALEI MNIPNAAFMV DLVVLVAVTS
CMNSSIYIAS RMMYSLAKRG DAPAFLNKTS KVGVPRAAVF GSTLIGAAIA ILNYFAPKGV
FEFLLASSGA IALLVYMVIA ISQLRMRRRL ERENAELKFR MWLFPWLTWA VIIFIGGALA
VMMYTPEHRV EVTATLSLAI FISFLGIVTA RGHERQAAGV RSLG
|
|---|
| |