| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0663 |
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| Symbol | |
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| ID | 6109572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 720170 |
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| End bp | 721525 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641620420 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_001747537 |
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| Protein GI | 170719849 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.139311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGC AGACGACTCC CGCACTCCAC ACCAGCACCC CCGTGGTCAC CGACCTGCGC
GTGATCCCGG TAGCCGGCCA TGACAGCATG CTGCTCAACC TCAGTGGCGC CCATGGCCCG
TTCTTCACCC GTAACGTTGT GGTGCTGCGT GACAGCGCCG GCAACACGGG CCTGGGCGAA
GTGCCCGGCG GCGAGAAGAT CCGCCAGACC CTGGAAGATG CCCGCAGCCT GGTGGTCGGC
CAGCCGATCG GCCACTACCA GCGTGTGCTC AATGCCATGC GCCAGACCTT CGCCAACCGC
GATGCTGGCG GGCGTGGCCT GCAGACCTTC GACCTGCGCA TTACCGTGCA TGCGGTGACG
GCCATCGAAT CGGCGCTGCT GGACTTGCTC GGCCAGCACC TCAATGTGCC CATGGCCGCG
CTGCTCGGCG AAGGCCAGCA GCGCGACGCG GTGAAAATGC TCGGCTACCT GTTCTATATC
GGTGACCGCC AGCAGACTGA CCTGGCTTAC CGCAACGAGG CCGACGCCGA TGATGACTGG
TTCCGCCTGC GTCACGAGAA GGCACTGACC CCTGAGGCCG TGGTGCGCCT GGCTGAAGCC
GCCAAGCAGC GCTATGGCTT CAGCGACTTC AAGCTCAAGG GCGGCGTGCT GCGTGGCGAA
GAGGAGATGG AGGCGGTGAC GGCGCTGGCC GAGCGCTTCC CCGAAGCGCG TATCACGCTT
GACCCCAATG GCGCCTGGTC ATTGCAAGAG GCCATCGCCC TGTGCCGTGA CAAGCACCAC
GTGCTGGCCT ATGCAGAAGA CCCGTGCGGT GCCGAAAACG GCTATTCGGG CCGTGAGGTG
ATGGCCGAGT TCCGCCGTGC CACCGGCTTG CCCACCGCCA CCAACATGAT CGCCACCGAC
TGGCGCCAGA TGGGCCATGC GATCCAGTTG CAATCGGTGG ACATCCCCTT GGCCGACCCA
CACTTCTGGA CCTTGCAGGG CTCGGTACGG GTGGCGCAGA TGTGCAACGA CTGGGGCCTG
ACCTGGGGTT CGCATTCGAA CAACCACTTC GATATTTCAT TGGCGATGTT CACCCAGGTA
GCTGCGGCGG CGCCGGGTGA GATCACGGCG ATCGACACCC ACTGGATCTG GCAGGACGGC
CAGCGTCTTA CCCGCGAGCC GCTGCGCATC GTCGACGGCC ATGTGCGCGT GCCAGAGCGC
CCAGGGCTAG GGGTGGAGCT GGATGAAGAC CAACTGGCCA AGGCCCATGA GTGCTACCGC
AGCATGGGGC TGGGAGCGCG GGATGACGGT GTGGCGATGC AGTTCCTGAT CCCGGGCTGG
ACGTTCGATA ACAAGCGGCC TTGCCTGGTG CGTTGA
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| Protein sequence | MNMQTTPALH TSTPVVTDLR VIPVAGHDSM LLNLSGAHGP FFTRNVVVLR DSAGNTGLGE
VPGGEKIRQT LEDARSLVVG QPIGHYQRVL NAMRQTFANR DAGGRGLQTF DLRITVHAVT
AIESALLDLL GQHLNVPMAA LLGEGQQRDA VKMLGYLFYI GDRQQTDLAY RNEADADDDW
FRLRHEKALT PEAVVRLAEA AKQRYGFSDF KLKGGVLRGE EEMEAVTALA ERFPEARITL
DPNGAWSLQE AIALCRDKHH VLAYAEDPCG AENGYSGREV MAEFRRATGL PTATNMIATD
WRQMGHAIQL QSVDIPLADP HFWTLQGSVR VAQMCNDWGL TWGSHSNNHF DISLAMFTQV
AAAAPGEITA IDTHWIWQDG QRLTREPLRI VDGHVRVPER PGLGVELDED QLAKAHECYR
SMGLGARDDG VAMQFLIPGW TFDNKRPCLV R
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