| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0662 |
|---|
| Symbol | |
|---|
| ID | 6109571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 718798 |
|---|
| End bp | 720150 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641620419 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001747536 |
|---|
| Protein GI | 170719848 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.144434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGACA CCCTCGATCC GTCTGCCCGT AACGGCGGCG ACGTGCTGGC CAGCGCCGTG
GCCAAGGTCA AGCGCCACGT CCTGCCGCTG TTCGTGATCA TGTTCATCGT CAACTACCTC
GACCGCGTCA ACATCGGCTT CGTCCGGCCG CATCTGGAAA GCGACCTTGG CATCAGCGCT
GCGGCCTATG GTTTTGGTGC CGGGTTGTTC TTCATCGGCT ATGCGCTGTT CGAAGTGCCC
TCGAACATGC TGTTGCAGCG CGTCGGCGCC CGCCTGTGGC TGACCCGCAT CATGTTCACC
TGGGGGTTGG TGGCCACTGC CATGGCCTTC GTGCAGAACG AAACCCAGTT CTACGTGCTG
CGCTTTTTGC TCGGTGTTGC CGAGGCCGGC TTCTTCCCTG GGGTGATCTA CTACTTCACC
CGCTGGCTGC CAGCCGCCGA ACGCGGCAAG GCGATTGCCA TCTTCCTCAG TGGCTCGGCG
CTGGCCTCGC TGATCTCCGG CCCCCTGGCC GGCGCGCTGA TGCAGATCCA GGGCCTGGGC
ATGCATGGCT GGCAGTGGAT GTTGTTCATC GAGGGCATGG CCTCGGTCAC GCTTTGCTTC
TTCGTGTTCT TCTGGCTCGA CTCCAAACCG CACGACGCCA AATGGCTGAG CAAGGCCGAG
CAGGATGCGC TGGTCGATAC CATCGACCGC GAGCAACGTG AGCGCGAAGC CACCGGCACC
GTCAAGGTAT CGTCCTGGAG CTTGCTCAAG GACCGCCAGA TCGTGCTGTT CTGCCTGATC
TACTTCTGCA TCCAGCTGAC CATCTACGCC GCGACATTCT GGTTGCCCAG CATCATCAAA
CGCATGGGTG ACCTGAGCGA CCTGCAGGTC GGCTTCTTCA ACTCCATCCC ATGGCTGATC
TCGATTCTGG CCATGTATGC CTTCGCCGCT GGCTCCTCAC GCTGGAAGTT CCAGCAGGCC
TGGGTGGCTG CGGCCCTGGT GATCGCGGCC ATCGGCATGT TCATGTCGAC CACGGGCGGG
CCGGTGTTCG CCTTTGTCGC GGTGTGCTTT GCCGCTATCG GTTTCAAGTC GGCCTCGTCA
CTGTTCTGGC CGATCCCCCA AGGCTATCTG GACGCGCGTA TCGCTGCTGC GGTGATCGCC
CTGATCAACT CCGTGGGCAA CTTGGGCGGC TTCGTCGCGC CCACCACTTT CGGCCTGCTC
GAGCAGCAGA CCGGGTCGAT CCAGGGTGGC CTGTACGGCC TGGCCGTGAC CTCGGTGCTG
GCGGCCATTG CGGTGTTCTT CGTGCGCACT CGCCCAAAGG GCGTCCCCTC CAATGACCTC
AAGGCCCCTT CGGCCTTGGG CCAGACCCAC TGA
|
|---|
| Protein sequence | MNDTLDPSAR NGGDVLASAV AKVKRHVLPL FVIMFIVNYL DRVNIGFVRP HLESDLGISA
AAYGFGAGLF FIGYALFEVP SNMLLQRVGA RLWLTRIMFT WGLVATAMAF VQNETQFYVL
RFLLGVAEAG FFPGVIYYFT RWLPAAERGK AIAIFLSGSA LASLISGPLA GALMQIQGLG
MHGWQWMLFI EGMASVTLCF FVFFWLDSKP HDAKWLSKAE QDALVDTIDR EQREREATGT
VKVSSWSLLK DRQIVLFCLI YFCIQLTIYA ATFWLPSIIK RMGDLSDLQV GFFNSIPWLI
SILAMYAFAA GSSRWKFQQA WVAAALVIAA IGMFMSTTGG PVFAFVAVCF AAIGFKSASS
LFWPIPQGYL DARIAAAVIA LINSVGNLGG FVAPTTFGLL EQQTGSIQGG LYGLAVTSVL
AAIAVFFVRT RPKGVPSNDL KAPSALGQTH
|
|---|
| |