| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0656 |
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| Symbol | |
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| ID | 6109565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 713519 |
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| End bp | 714433 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641620413 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001747530 |
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| Protein GI | 170719842 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000855576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.416487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTGC CGCTGATCTA CCACGATGAC TACAGCCCGG AGTTCCCACC CGAGCATCGT
TTCCCCATGG ACAAGTTCCG CCTGCTGCGC GACCACCTGG TCGAGAGCGG GCTGACCACC
GACCAGGCTT TGCTGCGCCC GCAAATCTGC CCCAACGACA TCCTCGCCCT GGCCCACGAC
CGCGACTACA TCGAGCGCTA TATGCACGGC GAACTGTCGC GCGAGGACCA GCGCCGCCTG
GGCTTGCCCT GGAGCGAGGC CTTGGCGCGG CGCACCGTGC GGGCAGTGGG CGGCTCGTTG
CTGGCTGCCG AAATGGCGCT GCAACACGGC CTGGCCTGCC ACCTGGCCGG CGGTACCCAC
CACGCCCACT TTGACCACCC AGCCGGTTTC TGCATCTTCA ACGACCTGGC CGTGATCAGC
CGCTACCTGC TTGAGGCCGG GCGGGTGCAC CGGGTGCTGA TCTTCGATTG CGACGTGCAC
CAGGGCGATG GCACCGCGCG CATCCTGCAG GACACCCCGG ACGCCATCAC CGTATCGTTG
CACTGCGAAC AGAACTTCCC GGCGCGCAAG GCCCACAGCG ACTGGGACAT TCCGCTACCG
CGGGGCATGG GTGACGCCGC CTACCTGAAG GTGGTGGAAG ACGCGCTCAA CTACCTGTTG
CCGCTGTATC AACCCGACCT GGTGCTGTAT GACGCCGGCG TGGATGTCCA TAAGGACGAT
GCCCTCGGCT ATCTGCAACT GACCGATGCT GGCTTGGCTG CGCGCGACGA GCATGTCATG
CGCCACTGCC TGGGGCGGGA TATCCCGGTA GTCGGCGTGA TCGGCGGCGG CTACAGCAAG
GACCGCCACG CCTTGGCGCG GCGCCACGGC ATCCTCCACC ACAGCGCGGC GAAGGTCATC
AGTTGTTCAC AATGA
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| Protein sequence | MPLPLIYHDD YSPEFPPEHR FPMDKFRLLR DHLVESGLTT DQALLRPQIC PNDILALAHD
RDYIERYMHG ELSREDQRRL GLPWSEALAR RTVRAVGGSL LAAEMALQHG LACHLAGGTH
HAHFDHPAGF CIFNDLAVIS RYLLEAGRVH RVLIFDCDVH QGDGTARILQ DTPDAITVSL
HCEQNFPARK AHSDWDIPLP RGMGDAAYLK VVEDALNYLL PLYQPDLVLY DAGVDVHKDD
ALGYLQLTDA GLAARDEHVM RHCLGRDIPV VGVIGGGYSK DRHALARRHG ILHHSAAKVI
SCSQ
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