| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0654 |
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| Symbol | |
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| ID | 6109563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 710719 |
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| End bp | 712038 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641620411 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001747528 |
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| Protein GI | 170719840 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000031459 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.38064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCG CCAAACTCGG CCTGATCGAA CCGTTGCTGC GCACCCTGCA GCAGCTGGAC
TACACCACCC CGACCCCGGT CCAGGCCCAG GCCATCCCCG CCGTGCTGGC CGGCCGCGAC
CTGATGGCCG CAGCCCAGAC CGGCACCGGC AAGACTGCCG GTTTTGCGCT GCCTGTGCTG
CAGCGCCTGG CCCTGGAAGG GGAAAAGGTC GCCAGCAACT CGATCCGTGC GCTGGTGTTG
GTACCGACCC GTGAATTGGC CGAGCAGGTG CACAACAACG TGCGCGAATA CGCCGAAAAC
CTGCCGCTCA GCACTTACGC GGTGTATGGC GGGGTCAGCA TCAACCCGCA AATGATGCGC
CTGCGTCGTG GCGTCGACCT GCTGGTGGCT ACCCCGGGGC GCTTGCTCGA CCTGTTCCGC
CAGAACGCGG TGAAGTTCAA CCAGGTGCAG ACCCTGGTGC TCGACGAAGC CGACCGCATG
CTCGACCTGG GTTTTGCCGA AGAGCTGCAG TCGGTATACG CGGCACTGCC GCGCAAGCGC
CAGACGCTGC TGTTCTCCGC TACCTTCTCT GACCAGATCC GCATGCTGGC AGGGCTGGCG
CTCAATGACC CGCTGAGCAT CGAGGTCAGC CCGCGCAACG CGGCTGCCAC CACGGTCAAG
CAGTGGCTGG TGCCGGTGGA CAAGAAGCGC AAGGTCGACC TGTTCTGCCA CCTGCTGCGC
AAGCAGCGCT GGAAGCAGGT ACTGGTGTTT GCCAAGACTC GCAATGGCGT AGACCAGTTG
GTCGAGCGGC TGCTGGGCGA GGGCGTGAAC GCCGATGGCA TTCACGGTGA CCGCCCGCAA
GCCACGCGCC AGCGCGCGCT GGACAGCTTC AAGGCCCGTG AGATCCAGGT ACTGGTCGCC
ACCGACGTTG CCGCCCGTGG CCTGGACATC GACGACCTGC CGTTGGTGGT CAACCTCGAC
CTGCCGATCG TGGCCGAGGA TTATGTGCAC CGTATTGGTC GCACGGGCCG TGCAGGCAAT
AAAGGCGAGG CGATCTCGCT GGTATGCGCC GATGAAGTGC AGCAGTTGGC CACGATCGAG
ACGCTGATTC GCCAGACCTT GCCGCGCCAC GAGGAACCGG ACTTCATCCC TGATCACCGG
GTGCCGATGA CCGATGCCAG TGGCCAGGTG ATCAAGAAGC CGAAAAAGCC CAAGAAGCCG
AAAGAGAACA GTGCCAAGCG CGGGCTGGGG CGCTGGATGG ACAGTGGCGA CGAGGCTCCG
GTCAAGTCGG TGCGCAAAGT GCCGAGCTTC AATACCGGGC CGAAGAAGCG CAAGCCCTGA
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| Protein sequence | MNFAKLGLIE PLLRTLQQLD YTTPTPVQAQ AIPAVLAGRD LMAAAQTGTG KTAGFALPVL
QRLALEGEKV ASNSIRALVL VPTRELAEQV HNNVREYAEN LPLSTYAVYG GVSINPQMMR
LRRGVDLLVA TPGRLLDLFR QNAVKFNQVQ TLVLDEADRM LDLGFAEELQ SVYAALPRKR
QTLLFSATFS DQIRMLAGLA LNDPLSIEVS PRNAAATTVK QWLVPVDKKR KVDLFCHLLR
KQRWKQVLVF AKTRNGVDQL VERLLGEGVN ADGIHGDRPQ ATRQRALDSF KAREIQVLVA
TDVAARGLDI DDLPLVVNLD LPIVAEDYVH RIGRTGRAGN KGEAISLVCA DEVQQLATIE
TLIRQTLPRH EEPDFIPDHR VPMTDASGQV IKKPKKPKKP KENSAKRGLG RWMDSGDEAP
VKSVRKVPSF NTGPKKRKP
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