| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0648 |
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| Symbol | |
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| ID | 6109557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 704371 |
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| End bp | 706899 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641620405 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_001747522 |
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| Protein GI | 170719834 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.242487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.649022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCCT TACCAATCGA TGCTGCCCTG CCGGCTTTGC GCCATGCCTT GGAAAACCGT
CACGAAGCGG TGCTCGAGGC GCCGCCCGGC GCAGGCAAGA CTACCCGTGT ACCGCTGGCA
CTGTTGAATG AACCCTGGTT GGCCGGGCAA ACCATCGTGA TGCTGGAGCC GCGCAGGTTG
GCGGCGCGTG CGGCGGCAGA ACGGCTGGCC AGTGAGCTGG GCGAGAAAGT CGGTGAAACG
GTGGGTTACC GCATTCGCCT GGACAGCAAG GTCGGGCCCA ATACCCGTAT CGAAGTGGTC
ACCGAAGGCA TCCTGACCCG CCGGTTGCAG GCAGACCCTG CGCTGGAGGG CGTAGGGCTG
CTGATCTTCG ATGAGTTTCA CGAGCGTAGC CTGGATGCCG ACCTGGCCTT GGCGCTGAGT
CTCAATGGCC GGGAGCTGCT GCGCGACGAT CCGCCGCTGA AAATTCTGCT GATGTCCGCA
ACCCTGGAGG GCGAGCGCCT GTCCCGCCTG CTCGACGACG CGCCGGTGAT CAGCAGCGAA
GGCCGCATGT ACCCGGTTGA TATTCGTTGG GGCCGGCCGT TCCAGCCAGG GGAATTCATC
GAGCCGCGGG TGGTGGACAG CGTGCTGCAG GCCTTGGCCG ATCAACCCGG CAGTGTGCTG
GTGTTCCTCC CCGGCCAGGC TGAGATCCGC AGGGTTCACC AACGTTTGCA GGAATCATTG
GCCGAGCGCC CGGACATTCT GCTGTGCCCC TTGCATGGCG AACTCGACCT CAATGCCCAG
CGTGCGGCCA TCGATCCGGC GCCCCAGGGC CTGCGCAAGG TCGTTCTGGC CACAAACATC
GCCGAGACCA GCCTGACCAT CGACGGTGTG CGCGTGGTCA TCGATGCCGG CCTTGCCCGG
GTACCGCGTT TCGACCCCGG CAGCGGCATG ACGCGCCTGG ACACCCAGCG TATCTCCCGT
GCCAGCGCCA CCCAGCGGGC TGGCCGTGCG GGGCGCCTGG AACCGGGCGT TTGCTACCGC
CTGTGGTCAG AGACCCAGCA CGACCAGTTG GCAGCACATG GCAGTGCCGA AATCCTCCAG
GCAGACCTGG CGGGCCTGGC GTTGCAGCTT GGTCGATGGG GTGTTGCGCC TGACCAGTTG
CGCTGGCTGG ACCAGCCTCC AGCGGCGGCA TTTTCCCAGG CGCAGGACCT GCTGGCGCGG
CTTGGCGCTT TCAAGCTGGG CAGCCGCGAT AACCTCAGTG AACACGGCCA GGCCATGGCC
GAGCTTCCGG CTCACCCGCG TATCGCTCAC CTGCTGCTGC GCGGCCAGGA TCTGGGCTTG
GCCGCGATGG CCTGCGATGT TGCCGCCTTG TTGGGCGAGC GCGATATCCA GCGCGCAGGT
GGCGCCGACC TGCATAGCCG GCTGGCACTG ATCAGCGGCG ACAGCAAGGT CAGCCGTGAC
GCCCAGGGAG GTGTGCAGCG TGCCCGGCAG TTGGCCCGCC AGTACCGGGG GCTGCTGCGC
GGCAAGGCCA GGGCGGGGGT TGCCGATCCC GAGCATCCAC GCTGGCTCGG CGCCCTGCTG
GCGTTGGCCT ATCCCGACCG GGTTGCCCAG CAGCGTCGCG AAGGCGGGGC CGAGTACCGC
CTGGCCAACG GCCGTGCTGC TTTGTTCGCC GAGGCCGATG CGCTGATGAA ATGCCCGTGG
TTGGTCATCG CCGACCTGGG CAGCCGCCAG GGGCAGCGGG AGGAGCGGAT TTACCTGGCT
GCCGAATTCG ACCCGGCGCT GCTCGACGAT GTGCTGGCCG AACAGGTCGA GCGCGTCGAC
ATTCTCGACT GGGACGAGCG CGAGCAGGTG TTGCGTGCCG AGCGTCAGAC CAAGGTCGGC
GAACTGGTGC TCAGCCGTGA ACCGTTGCCT GGGCTGGATG ACGACGCCCG CGCCAGGGCA
CTGCTAGGCT TGGTGCGGCG CAAAGGCCTG AACCTGCTGA GCTGGACGCC AGAGCTACGC
CAGTGGCAGG CGCGCATAGC GCTATTACGC CAGCTAGACC TGGAAAAAGA CGGCCATAGC
GAGTGGCCCG ACCTAAGCGA CGAGGCGCTA CTGGCCAGCC TGGAGCACTG GCTGCAGCCT
TATCTGGGCA AAGTGTCCCG GCTGAGCCAT TTCGCCGCCC TGGACCTGCC TTCGATCTTG
CGTAATCTGT TGCCCTGGCC GCTGCCCCAG CGCCTGGACG AATGGGCGCC AGCGCACCTG
GCTGTGCCGT CGGGCTCCAG TATCCGCCTC GACTACAGTG AAAACCCGCC GATCCTCGCC
GTGCGCCTGC AAGAGCTGTT CGGCCTGGCT GACACACCGC GCATCGCCCA AGGTCGCCAG
CAGGTCAAGC TGCATCTGCT GTCGCCAGCG CGGCGGCCAG TGCAGGTGAC GCAGGACTTG
GCCAGCTTCT GGCGCACCAC CTATGCAGAG GTGAAGAAGG ACCTCAAGGG TAGATACCCC
AAGCATTACT GGCCGGACGA CCCGCTGGTG GCTGAGGCCA CCGCGCGGGC AAAACCGCGT
GGCACCTGA
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| Protein sequence | MISLPIDAAL PALRHALENR HEAVLEAPPG AGKTTRVPLA LLNEPWLAGQ TIVMLEPRRL
AARAAAERLA SELGEKVGET VGYRIRLDSK VGPNTRIEVV TEGILTRRLQ ADPALEGVGL
LIFDEFHERS LDADLALALS LNGRELLRDD PPLKILLMSA TLEGERLSRL LDDAPVISSE
GRMYPVDIRW GRPFQPGEFI EPRVVDSVLQ ALADQPGSVL VFLPGQAEIR RVHQRLQESL
AERPDILLCP LHGELDLNAQ RAAIDPAPQG LRKVVLATNI AETSLTIDGV RVVIDAGLAR
VPRFDPGSGM TRLDTQRISR ASATQRAGRA GRLEPGVCYR LWSETQHDQL AAHGSAEILQ
ADLAGLALQL GRWGVAPDQL RWLDQPPAAA FSQAQDLLAR LGAFKLGSRD NLSEHGQAMA
ELPAHPRIAH LLLRGQDLGL AAMACDVAAL LGERDIQRAG GADLHSRLAL ISGDSKVSRD
AQGGVQRARQ LARQYRGLLR GKARAGVADP EHPRWLGALL ALAYPDRVAQ QRREGGAEYR
LANGRAALFA EADALMKCPW LVIADLGSRQ GQREERIYLA AEFDPALLDD VLAEQVERVD
ILDWDEREQV LRAERQTKVG ELVLSREPLP GLDDDARARA LLGLVRRKGL NLLSWTPELR
QWQARIALLR QLDLEKDGHS EWPDLSDEAL LASLEHWLQP YLGKVSRLSH FAALDLPSIL
RNLLPWPLPQ RLDEWAPAHL AVPSGSSIRL DYSENPPILA VRLQELFGLA DTPRIAQGRQ
QVKLHLLSPA RRPVQVTQDL ASFWRTTYAE VKKDLKGRYP KHYWPDDPLV AEATARAKPR
GT
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