| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0616 |
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| Symbol | |
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| ID | 6109525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 672698 |
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| End bp | 673708 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620373 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_001747490 |
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| Protein GI | 170719802 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.573967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCAG TGCGTAACTG GGCTGCCCGT TTTGCGCCGT GGTTCGGCGC GGTGGGCCTG
TTCGCCGCTG TCCAGCAGGC GCATGCCGGC GATTATGACG GCTCGCCTCA GGTGGCCGAA
TTCGTCGGTG AGATGAGCCG CGACTATGGC TTTGCCAGCG AGCAGTTGAT GGGCGTGTTC
CGCGAGGTCC AGCGCAAGCA ATCGATCCTG GACGCCATTT CGAGGCCGGC CGAGCGGGTA
AAACCGTGGA AGGATTACCG GCCGATGTTC ATTACCGACG CGCGCATCGC CCGCGGTGTG
GACTTCTGGC GCCAGCATGA AGCGGTGCTG GCCCGGGCGG AGCAGGAATA CGGCGTACCG
GCGCAGTACA TCGTCGCGAT CATCGGCGTA GAAACCTTTT TTGGCCGCAA CACTGGCAAC
TACCGTGTGA TCGACGCCTT GTCGACCCTG GGCTTCGATT ACCCGCCACG CGCCGAGTTC
TTCCGCAAGG AGCTGCGCGA GTACCTGCTG TTGTCGCGCG AAGAGCAGCT CGACCCGCTG
ACCCTCAAAG GTTCATACGC CGGTGCCATG GGCCTGCCGC AGTTCATGCC GAGCAGCTTT
CGCAACTACG CGGTGGACTT CGATGGCGAT GGCCACATCA ATATCTGGAA CAACCCCGAC
GATGCCATCG GCAGTGTCGC CAGCTACTTC AAAGAGCACG GCTGGGTGGC TGGGCAGGGC
GTGGTCAGTC GCGCCCAGGT CAGTGGTGCG CGGGCAGACG AAGGCCTGAC CACGGGCATC
GAGCCGGTGA AAACCGTCGC AGAGTTGCAG GCGCTTGGCT GGTCGAGTCA TGATGCGTTG
CGCGGTGATC TGCCAGTCAC CGCCTTCCGT CTGGAAGGCG CAAGCGGGCC TGAATACTGG
TTGGGCCTGA AGAATTTCTA CGCGATCACT CGCTACAACC GCAGCGTGAT GTATGCCATG
GCGGTGCATC AGCTTTCGGA ACAGCTGGTC CAAGCACGGG GCGTCAAGTA A
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| Protein sequence | MQAVRNWAAR FAPWFGAVGL FAAVQQAHAG DYDGSPQVAE FVGEMSRDYG FASEQLMGVF
REVQRKQSIL DAISRPAERV KPWKDYRPMF ITDARIARGV DFWRQHEAVL ARAEQEYGVP
AQYIVAIIGV ETFFGRNTGN YRVIDALSTL GFDYPPRAEF FRKELREYLL LSREEQLDPL
TLKGSYAGAM GLPQFMPSSF RNYAVDFDGD GHINIWNNPD DAIGSVASYF KEHGWVAGQG
VVSRAQVSGA RADEGLTTGI EPVKTVAELQ ALGWSSHDAL RGDLPVTAFR LEGASGPEYW
LGLKNFYAIT RYNRSVMYAM AVHQLSEQLV QARGVK
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