Gene PputW619_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0600 
Symbol 
ID6109509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp658730 
End bp659359 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content65% 
IMG OID641620357 
Productaromatic acid decarboxylase 
Protein accessionYP_001747474 
Protein GI170719786 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGGC CGGAACGTAT CACGCTGGCC ATGACCGGCG CCTCCGGCGC GCAGTATGGC 
TTGCGTCTGC TCGATTGCCT GGTGCGCGAA GACCGTGAGG TGCATTTTCT CATCTCCAAG
GCCGCGCAAT TGGTGATGTC CACCGAGACC GACGTGCTGC TGCCGCCCAA GCCTCAGGCC
ATGCAGGCCT TTCTCACCGA GTACACCGGT GCTGCCGATG GGCAGATCCG CGTGTACGGC
AAGGAGGACT GGATGTCGCC GGTGGCCTCG GGCTCCGGCG CACCGGCTGC CATGGTGGTG
GTGCCGTGCT CCACCGGCAC CTTGTCGGCC ATCGCCACCG GGGCCTGCAA CAACCTGATC
GAGCGTGCCG CCGACGTGAC CCTCAAGGAG CGTCGCCAGC TGATCCTGGT GCCGCGGGAG
GCGCCGTTTT CGACCATCCA TCTGGAGAAC ATGCTCAAGC TCTCGCAGAT GGGGGCGGTT
ATCTTGCCGG CGGCCCCCGG CTTCTATCAC CAGCCGCAGA CAATCGATGA CCTGGTCGAC
TTCGTCGTGG CGCGCGTTCT CAACCTGCTG AACATCCCGC AGGACATGTT GCCGCGTTGG
GGGGAGCATC ATCTTGGGGC GGATGATTGA
 
Protein sequence
MSGPERITLA MTGASGAQYG LRLLDCLVRE DREVHFLISK AAQLVMSTET DVLLPPKPQA 
MQAFLTEYTG AADGQIRVYG KEDWMSPVAS GSGAPAAMVV VPCSTGTLSA IATGACNNLI
ERAADVTLKE RRQLILVPRE APFSTIHLEN MLKLSQMGAV ILPAAPGFYH QPQTIDDLVD
FVVARVLNLL NIPQDMLPRW GEHHLGADD