| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0586 |
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| Symbol | |
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| ID | 6109495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 642706 |
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| End bp | 644880 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641620343 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001747460 |
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| Protein GI | 170719772 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTT TCAAAGGTGT GGGAAGCCCC CGACGGGTGC GGGGCTGGCT GATGCTGGGG
TTGTTGGCGC CGTTTTCTTT GTCGGCACTG GCCGAAACGG TCGCCAGTGA GGTTGCTGCG
GACAGCTCGC TCGACCTGCC GGCGCTGACC ATCGAAGGCA ACCGCCTGTA CGACATGCTG
CCTTCGGAAG AAACCGGCGG TTACAGCGTC GACGCTGCCA CGGTGGGCAC CAAGACCCCA
GCGTCGCTCA AGGAAATACC GCAGTCGGTC ACCGTCTACA CCCAGGACTA CGTCAAAGAC
CGCCAGTTCG TGCACCTCGA TGACCTGGCC AAGTACACCG CGGGCCTGCG AACCCTGACC
AACGACAGCG GGCGGTCGTC GATCTATGCC CGTGGTTACG AGTACAGCGA GTTCAACATC
GACGGCCTGC CGGCGCCCAT GGCCAGTATT TTTGGCACCG TGCCGTCGCT GGCGGCATTC
GACCGCGTGG AGATCATGCG CGGCCCGGCG GGGTTGTTCA GCAGCACCAG CGAGCTTGGC
GGTATCGTCA ACATGGTGCG TAAGCGCCCG ACCGCCGAGT TTCAGGGCCA CGTCGAAGCC
AGCTACGGCA CCTGGGACAC TAACCACGAA GAAATCGACC TGAGCGGGCC GCTGGATGAT
GCAGGCCGGG TGCGCGGGCG ATTCGTTGCA GCGCGTGACG ACACCAATGG TGAAGTGGAC
TACAACGCCA ATACCAGCAA CAGCTACTAC GGCGCGCTGG ACATCGACCT TGATGACGAC
ACCCAGCTGT CATTCGGCCT GATCCACGAA GTGAAGAACA TCACCCCGCA CAACGGCTAC
CCGGCAACGC TGTCTGGTGA GGTCCCCGAT TTCAGCCATT CGAAGTTCCT TGGCGCTGAC
TGGAACTACT TCGACGGCAA GACCACCGAC CTGGTTGCTG AGTTGACGCA CCGCTTTGAC
AACGGTGGTT ATGGCCGTAT CGCCGCCCGT GGCTCGCACC GCGACACCAA CTACCTCTAT
GCCTTCACTG CGACCAATGC CACCACCGGT GCCAACTCCG AGCGTGCCAG TGCCCGGGAC
TTCACCCAGG ATACCTATTC GCTGGACGCC AGCTACAGCC AGCCGTTCGA AACCTTCGGC
CAGGTCAGCG AATTCGTGGT AGGCACTGAC TACAAGAACT ACGACACCGA GTACCTCAAC
GGCACCACCA ACCTGGGGGC CATCAACGTC AGCAGCTACT CGCCGACCCA GTTCGCCAAG
CCGTCACCGA ACTACAGCAC CGAAACCGGC ATGCAGGAGG AAGAGTACGG CCTGTACTCC
AAGGTCACCT TCCGTCCGGT CGAGCGTTTG GCGCTGATTG CTGGTGGCCG CTTCAGCTGG
TATCGCGGTG ATTTCTACAC CACTACCCTG AGCACTGCTT CGACTGTCGA TGACAACAAA
CGCGTGGATG GACGCTTCAC GCCGTACGGT GGGGTGGTCT ACGACCTGAC TGATAGCCAT
GCGCTGTATG CCAGCTATTC GCAGGTATTC AAGCCGCAGT CAGACACCGA CAGCAATGGC
CGTGTGCTCA AACCCCGTGA AGGCGAGCAG TATGAGTTCG GCCTCAAGAG CAGTTACTTT
GGCGGCGACC TCAATACGCG TGTCTCGGTG TTCCGATTGA CCGATGAGAA CCGCGCCAGC
ACCGAATACG ATGAAGATGG TGTAGACACC GGTTTCTCCG TGGCATCGGG CAAGACGCGC
GTGAAGGGTG CCGAAGTGGA AGTCAGCGGC AAGCTGACGC CGAACTGGGA GCTGCTGGCG
GGCTACACCT GGATGGAAAC CGAAACCCTC GACGGTGATG CCGAAACCAC CTTCTTCATC
ATGCCGCGCA ACCAGGCGTC GCTGTGGAGC AAGTACACCA TCAGCCGAGG GCCTTTGACC
GGGCTGGCCA TTGGTGGCGG CGTCTCGGCG ATGAGCAACT TCTATTCCGA GAGCGGCGGC
GTGCGCATCG ATGCGCCGGG TTACGCCACG GTGGATGCGA TGCTGTCGTA CCCGGTCACC
TCGAAGCTGA CGGCCACCTT TAACGTCAAC AACTTGTTCG ACCGCGATTA CCTGTCGCGG
GTGGGGTCGA CTTCGACGTT CAACTTCTAT GGGCCTTCGC GCAGCATGAT GGTTGGTGCA
CGTTACGATT TCTGA
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| Protein sequence | MSGFKGVGSP RRVRGWLMLG LLAPFSLSAL AETVASEVAA DSSLDLPALT IEGNRLYDML
PSEETGGYSV DAATVGTKTP ASLKEIPQSV TVYTQDYVKD RQFVHLDDLA KYTAGLRTLT
NDSGRSSIYA RGYEYSEFNI DGLPAPMASI FGTVPSLAAF DRVEIMRGPA GLFSSTSELG
GIVNMVRKRP TAEFQGHVEA SYGTWDTNHE EIDLSGPLDD AGRVRGRFVA ARDDTNGEVD
YNANTSNSYY GALDIDLDDD TQLSFGLIHE VKNITPHNGY PATLSGEVPD FSHSKFLGAD
WNYFDGKTTD LVAELTHRFD NGGYGRIAAR GSHRDTNYLY AFTATNATTG ANSERASARD
FTQDTYSLDA SYSQPFETFG QVSEFVVGTD YKNYDTEYLN GTTNLGAINV SSYSPTQFAK
PSPNYSTETG MQEEEYGLYS KVTFRPVERL ALIAGGRFSW YRGDFYTTTL STASTVDDNK
RVDGRFTPYG GVVYDLTDSH ALYASYSQVF KPQSDTDSNG RVLKPREGEQ YEFGLKSSYF
GGDLNTRVSV FRLTDENRAS TEYDEDGVDT GFSVASGKTR VKGAEVEVSG KLTPNWELLA
GYTWMETETL DGDAETTFFI MPRNQASLWS KYTISRGPLT GLAIGGGVSA MSNFYSESGG
VRIDAPGYAT VDAMLSYPVT SKLTATFNVN NLFDRDYLSR VGSTSTFNFY GPSRSMMVGA
RYDF
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