| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0554 |
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| Symbol | |
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| ID | 6109463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 615325 |
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| End bp | 616257 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641620311 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001747428 |
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| Protein GI | 170719740 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.108773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACG CCCCCATCCT GATCACCGGC GGCGCCGGCT TCATTGGCTC CCACCTGTGC
GATGCGTTGC TGGCTAAAGG CTACGCGGTG CGTGTGCTGG ACGACCTTTC CACTGGCAAG
CGCGACAACC TGCAACTGGG CAACCCGCGC CTTGAGCTGG TCGAGGGTGA TGTTGCCGAT
GCCGCATTGG TGCAGCGCGC CGCGGCAGGT TGCAGCGCTG TGGTCCACCT GGCCGCGGTG
GCTTCGGTGC AGGCGTCGGT CGAAGACCCG GTCAAGACCC ACCAGAGCAA TTTCATCGGC
ACCCTCAATG TTTGTGAGGC CATGCGCCTG CAGGGCGTGC GCCGGGTGGT GTTCGCCTCC
AGCGCGGCGG TGTACGGCAA TAACGGCGAA GGCCAGTCGA TTGCCGAGGA TACGCCCAAG
GCACCGCTGA CCCCCTATGC GGTGGACAAG CTGGCCAGCG AGCAGTACCT GGACTTCTAC
CGCCGCCAGC ATGGGCTGGA GCCGGTGGTG TTCCGCTTCT TCAACATCTT CGGGCCGCGC
CAGGACCCTT CGTCCCCGTA CTCCGGGGTG ATCAGCATTT TCAGTGAGCG GGCCACCCAA
GGGTTGCCGA TCACGGTGTT CGGCGACGGC GAGCAAACTC GGGATTTCCT GTATGTGGGC
GACCTGGTGC AGGTGATGGT GCAGGCGCTC GAGCAGCCGC AGGTGGAAGA GGGCGCGGTG
AATATCGGCC TGAACCAAGC GACTTCGCTG AACCAGTTGC TCAAGGCGCT GGAAACCGTG
GTCGGCAGCT TGCCGCCTGT CAGCTATGGC GAGGCTCGTT CGGGTGACAT TCGCCACTCG
CGGGCGGATA ACCAGCGTTT GCTGGCACGA TTCGATTTTC CGCAGCCGAC TTCGATGGTC
GAAGGGCTGG CGCACTTGCT CGGCAAGGCG TGA
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| Protein sequence | MADAPILITG GAGFIGSHLC DALLAKGYAV RVLDDLSTGK RDNLQLGNPR LELVEGDVAD
AALVQRAAAG CSAVVHLAAV ASVQASVEDP VKTHQSNFIG TLNVCEAMRL QGVRRVVFAS
SAAVYGNNGE GQSIAEDTPK APLTPYAVDK LASEQYLDFY RRQHGLEPVV FRFFNIFGPR
QDPSSPYSGV ISIFSERATQ GLPITVFGDG EQTRDFLYVG DLVQVMVQAL EQPQVEEGAV
NIGLNQATSL NQLLKALETV VGSLPPVSYG EARSGDIRHS RADNQRLLAR FDFPQPTSMV
EGLAHLLGKA
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