| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0548 |
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| Symbol | |
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| ID | 6109456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 607286 |
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| End bp | 608713 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641620304 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_001747422 |
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| Protein GI | 170719734 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.147839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAA GCCTCGCTAG CAATACGCCA CGGCTCCCTT CCATCGACAC CCTGCTACGT
CACCCGGCCT GCCTCCCGCT GATCGAGCGT CATGGCCGCG ACGCAGTGCT CGCCACCCTG
CGCCAACTGC TCGACGACCT GCGCGAACCT GTTCGCAACG GCCAGCTCGA CGCTGCCGAA
CTGGGCGCTG AAATCCTCCT GGGCCGCAGC GGCGAGCGCC TGGCCCTCCA GCAGCGCAGC
CAGGTACGAC GCGTCTTCAA CCTTACCGGC ACGGTACTGC ACACCAACCT CGGTCGTGCC
CTGTTGCCTG AGGAAGCCGT TGAAGCCATG CAGACCGCCG CCCGCTATCC GCTTAACCTG
GAGTTTGACC TTGCCACCGG CAAGCGTGGC GATCGAGATG ATCTCATCGA AGGGCTGATC
CGCGAGCTGA CCGGCGCCGA AGCGGTCACC GTGGTCAACA ACAACGCGGC CGCCGTGCTG
CTTGCGCTCA ACAGCCTGGG CGCGCGCAAG GAGGGCATCA TTTCCCGCGG TGAGCTGATC
GAGATCGGCG GCGCCTTTCG CATTCCCGAC ATCATGGCCC GTGCCGGTGT ACGCCTGCAC
GAGATCGGCA CCACCAACCG CACCCATGCC CGCGACTACG AAGCTGCCAT CGGCCCGCGT
ACCGGCTTGT TGATGCGGGT GCATTGCAGC AACTACAGCA TCCAGGGTTT CACCACCCAG
GTGCCTACCG CGGAGCTCGC GCGAATCGCC CATCAGCATG ATCTGCCGCT GCTGGAAGAC
CTGGGCAGCG GCAGCCTGCT CGACCTGACC CGCTGGGGCC TGCCCGCCGA ACCGACCGTG
CGCCAGGCCC TGGCCGATGG CGCGGATATC GTGACCTTCA GCGGTGACAA GCTGCTTGGC
GGCCCCCAGG CCGGGATCAT CGTTGGTCGC AAGGATTTGA TCGCGAGGAT CAAGAAGAAC
CCGCTGAAAC GTGCACTGCG CGTCGACAAA ATCACCCTCG CTGCCCTCGA AGCCGTGCTG
GCGCTGTACC GCAACCCGGA CAAGCTGGTC GAGCGCTTGC CCAGCCTGCG CCTGTTGACC
CGCAGCCAGG CTGAAATCCA CGCCCAGGCC GAGCGCCTGG CACCCGAGCT CAAGGCCCGT
CTCGGGGGGC AATGGGCCGT CAGCGTCGAG CCGGCGCTCG GCATGATCGG CAGCGGCAGC
CAGCCGGTTG CACGCCTGCC CAGCGCCGCG CTGTGCCTGC GCCCACAGGT GTCGAAGAAA
CTGCGCGGGC GCAGCCTGCA TGTGCTGGAA CGCGCCTTGC GCGATCTTGC GGTGCCCGTG
CTCGGCCGTA TCGACGATGA CGCGCTGTGG CTCGACCTGC GTCAGCTGGA CGACGAAGCT
CAGTGGTTGG CGCAGTTACC GGCCCTGCAA TTGGGGCCAG TGCAGTGA
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| Protein sequence | MSSSLASNTP RLPSIDTLLR HPACLPLIER HGRDAVLATL RQLLDDLREP VRNGQLDAAE
LGAEILLGRS GERLALQQRS QVRRVFNLTG TVLHTNLGRA LLPEEAVEAM QTAARYPLNL
EFDLATGKRG DRDDLIEGLI RELTGAEAVT VVNNNAAAVL LALNSLGARK EGIISRGELI
EIGGAFRIPD IMARAGVRLH EIGTTNRTHA RDYEAAIGPR TGLLMRVHCS NYSIQGFTTQ
VPTAELARIA HQHDLPLLED LGSGSLLDLT RWGLPAEPTV RQALADGADI VTFSGDKLLG
GPQAGIIVGR KDLIARIKKN PLKRALRVDK ITLAALEAVL ALYRNPDKLV ERLPSLRLLT
RSQAEIHAQA ERLAPELKAR LGGQWAVSVE PALGMIGSGS QPVARLPSAA LCLRPQVSKK
LRGRSLHVLE RALRDLAVPV LGRIDDDALW LDLRQLDDEA QWLAQLPALQ LGPVQ
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